Evidence map›Paper›PMID 19181795›Full record

ArticleJournal of bacteriology2009

The putrescine Importer PuuP of Escherichia coli K-12.

Shin Kurihara, Yuichi Tsuboi, Shinpei Oda, Hyeon Guk Kim, Hidehiko Kumagai, Hideyuki Suzuki

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Exploring the Potential of a Genome-ReducedInternational journal of molecular sciences · 2023
    Article
  7. Biomedicines · 2023
    Article
  8. Isolation of the high polyamine-producing bacteriumBioscience of microbiota, food and health · 2023
    Article
  9. Review
  10. Article
  11. The citrus plant pathogenBiochemistry and biophysics reports · 2021
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Frontiers in microbiology · 2017
    Article
  19. A Novel Putrescine Exporter SapBCDF of Escherichia coli.The Journal of biological chemistry · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shin KuriharaDivision of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Goshokaido-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
Yuichi Tsuboi
Shinpei Oda
Hyeon Guk Kim
Hidehiko Kumagai
Hideyuki Suzuki

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Puu pathway is a putrescine utilization pathway involving gamma-glutamyl intermediates. The genes encoding the enzymes of the Puu pathway form a gene cluster, the puu gene cluster, and puuP is one of the genes in this cluster. In Escherichia coli, three putrescine importers, PotFGHI, PotABCD, and PotE, were discovered in the 1990s and have been studied; however, PuuP had not been discovered previously. This paper shows that PuuP is a novel putrescine importer whose kinetic parameters are equivalent to those of the polyamine importers discovered previously. A puuP(+) strain absorbed up to 5 mM putrescine from the medium, but a DeltapuuP strain did not. E. coli strain MA261 has been used in previous studies of polyamine transporters, but PuuP had not been identified previously. It was revealed that the puuP gene of MA261 was inactivated by a point mutation. When E. coli was grown on minimal medium supplemented with putrescine as the sole carbon or nitrogen source, only PuuP among the polyamine importers was required. puuP was expressed strongly when putrescine was added to the medium or when the puuR gene, which encodes a putative repressor, was deleted. When E. coli was grown in M9-tryptone medium, PuuP was expressed mainly in the exponential growth phase, and PotFGHI was expressed independently of the growth phase.

Indexed as

Culture MediaEscherichia coli K12Escherichia coli ProteinsGene DeletionGene Expression ProfilingKineticsMembrane Transport ProteinsPutrescineCulture MediaEscherichia coli ProteinsMembrane Transport ProteinsPutrescinePuuP protein, E coli

Identifiers

PMID19181795
PMCPMC2668393

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.