Evidence map›Paper›PMID 19177353›Full record

ArticleProtein science : a publication of the Protein Society2009

Solution structure of the RNA binding domain in the human muscleblind-like protein 2.

Fahu He, Weirong Dang, Chikage Abe, Kengo Tsuda, Makoto Inoue, Satoru Watanabe, Naohiro Kobayashi, Takanori Kigawa, Takayoshi Matsuda, Takashi Yabuki and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. MBNL2 Regulates DNA Damage Response via Stabilizing p21.International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Mechanistic determinants of MBNL activity.Nucleic acids research · 2016
    Article
  8. Article
  9. Creatine kinase B is necessary to limit myoblast fusion during myogenesis.American journal of physiology. Cell physiology · 2015
    Article
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 2 countries.

Fahu HeRIKEN Systems and Structural Biology Center, Yokohama 230-0045, Japan.
Weirong Dang
Chikage Abe
Kengo Tsuda
Makoto Inoue
Satoru Watanabe
Naohiro Kobayashi
Takanori Kigawa
Takayoshi Matsuda
Takashi Yabuki
Masaaki Aoki
Eiko Seki
Takushi Harada
Yuri Tomabechi
Takaho Terada
Mikako Shirouzu
Akiko Tanaka
Peter Güntert
Yutaka Muto
Shigeyuki Yokoyama
Systems Biology Institute · JPFrankfurt Institute for Advanced Studies · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The muscleblind-like (MBNL) proteins 1, 2, and 3, which contain four CCCH zinc finger motifs (ZF1-4), are involved in the differentiation of muscle inclusion by controlling the splicing patterns of several pre-mRNAs. Especially, MBNL1 plays a crucial role in myotonic dystrophy. The CCCH zinc finger is a sequence motif found in many RNA binding proteins and is suggested to play an important role in the recognition of RNA molecules. Here, we solved the solution structures of both tandem zinc finger (TZF) motifs, TZF12 (comprising ZF1 and ZF2) and TZF34 (ZF3 and ZF4), in MBNL2 from Homo sapiens. In TZF12 of MBNL2, ZF1 and ZF2 adopt a similar fold, as reported previously for the CCCH-type zinc fingers in the TIS11d protein. The linker between ZF1 and ZF2 in MBNL2 forms an antiparallel beta-sheet with the N-terminal extension of ZF1. Furthermore, ZF1 and ZF2 in MBNL2 interact with each other through hydrophobic interactions. Consequently, TZF12 forms a single, compact global fold, where ZF1 and ZF2 are approximately symmetrical about the C2 axis. The structure of the second tandem zinc finger (TZF34) in MBNL2 is similar to that of TZF12. This novel three-dimensional structure of the TZF domains in MBNL2 provides a basis for functional studies of the CCCH-type zinc finger motifs in the MBNL protein family.

Indexed as

Zinc FingersAmino Acid SequenceBinding SitesHumansHydrophobic and Hydrophilic InteractionsModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularProtein Structure, SecondaryProtein Structure, TertiaryRNA-Binding ProteinsRNA, MessengerSequence Analysis, ProteinMBNL2 protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID19177353
PMCPMC2708044
OpenAlexW2122648226

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.