Evidence map›Paper›PMID 19177197›Full record

ArticleNeoplasia (New York, N.Y.)2009

Aberrant promoter methylation of SPARC in ovarian cancer.

Matthew J Socha, Neveen Said, Yanshan Dai, Joseph Kwong, Preetha Ramalingam, Vuong Trieu, Neil Desai, Samuel C Mok, Kouros Motamed

Open access · goldAbstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

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  17. Epigenetic basis of cancer health disparities: Looking beyond genetic differences.Biochimica et biophysica acta. Reviews on cancer · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Matthew J SochaVascular Biology Center, Medical College of Georgia, Augusta, GA 30912, USA.
Neveen Said
Yanshan Dai
Joseph Kwong
Preetha Ramalingam
Vuong Trieu
Neil Desai
Samuel C Mok
Kouros Motamed
Augusta University · USAbraxis (United States) · USBrigham and Women's Hospital · USHarvard University · US

Funding

REGULATION OF FGF 2 MEDIATED ANGIOGENESIS BY SPARCK01CA089689 · NCI · THE HOPE HEART INSTITUTE · PI MOTAMED, KOUROS · 2001 to 2004
$561k
NCI NIH HHS K01 CA089689NCI NIH HHS K01-CA089689
6 · The paper itself

Abstract

Epigenetic silencing of tumor suppressor genes is a new focus of investigation in the generation and proliferation of carcinomas. Secreted protein acidic and rich in cysteine (SPARC) is reportedly detrimental to the growth of ovarian cancer cells and has been shown to be epigenetically silenced in several cancers. We hypothesized that SPARC is downregulated in ovarian cancer through aberrant promoter hypermethylation. To that end, we analyzed SPARC expression in ovarian cancer cell lines and investigated the methylation status of the Sparc promoter using methylation-specific polymerase chain reaction. Our results show that SPARC mRNA expression is decreased in three (33%) and absent in four (44%) of the nine ovarian cancer cell lines studied, which correlated with hypermethylation of the Sparc promoter. Treatment with the demethylating agent 5-aza-2'-deoxycytidine rescued SPARC mRNA and protein expression. Addition of exogenous SPARC, as well as ectopic expression by an adenoviral vector, resulted in decreased proliferation of ovarian cancer cell lines. Investigation of primary tumors revealed that the Sparc promoter is methylated in 68% of primary ovarian tumors and that the levels of SPARC protein decrease as the disease progresses from low to high grade. Lastly, de novo methylation of Sparc promoter was shown to be mediated by DNA methyltransferase 3a. These results implicate Sparc promoter methylation as an important factor in the genesis and survival of ovarian carcinomas and provide new insights into the potential use of SPARC as a novel biomarker and/or treatment modality for this disease.

Indexed as

DNA MethylationPromoter Regions, GeneticAntimetabolites, AntineoplasticAzacitidineCell ProliferationDecitabineDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansOsteonectinOvarian NeoplasmsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerAntimetabolites, AntineoplasticAzacitidineDecitabineDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNMT3A protein, humanOsteonectinRNA, Messenger

Identifiers

PMID19177197
PMCPMC2631137
OpenAlexW1538312067

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.