Evidence map›Paper›PMID 19176230›Full record

ArticleVirology2009

Walleye dermal sarcoma virus rv-cyclin inhibits NF-kappaB-dependent transcription.

Sandra L Quackenbush, Ashley Linton, Connie D Brewster, Joel Rovnak

Open access · greenAbstract read
In one paragraph

Article in Virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sandra L QuackenbushDepartment of Microbiology, Immunology and Pathology, Campus Delivery 1619, Colorado State University, Fort Collins, CO 80523, USA. sandra.quackenbush@colostate.edu
Ashley Linton
Connie D Brewster
Joel Rovnak
Colorado State University · US

Funding

Walleye Dermal Sarcooma Virus Accessory Protein FunctionR01CA095056 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI QUACKENBUSH, SANDRA L · 2002 to 2012
$2.2M
NCI NIH HHS CA095056NCI NIH HHS R01 CA095056
6 · The paper itself

Abstract

The retroviral cyclin protein (rv-cyclin) of walleye dermal sarcoma virus contains two known functional domains, a cyclin box motif and a carboxy terminal transcription activation domain (AD). The AD contacts TATA-binding protein-associated factor 9 (TAF9), and this action is necessary for both positive and negative regulation of transcription from host and viral promoters. Negative regulation occurs via interference with TAF9 binding by transcriptional activators. Transcription factors that share a functional TAF9-binding motif include NF-kappaB. Rv-cyclin down regulates NF-kappaB-dependent transcription, whether induced by TNFalpha or by direct phosphorylation of IkappaB by expressed MEKK1. In rv-cyclin-expressing cells, NF-kappaB p65 is phosphorylated and translocated to the nucleus, where it forms heterodimers with p50 and binds NF-kappaB response elements. Furthermore, interference with NF-kappaB is dependent upon an intact TAF9-binding motif in rv-cyclin. The outcome of this NF-kappaB down regulation is likely to be important in the control of virus replication and tumorigenesis.

Indexed as

Transcription, GeneticCell NucleusCyclinsEpsilonretrovirusHeLa CellsHumansNF-kappa BViral ProteinsCyclinsNF-kappa BViral Proteins

Identifiers

PMID19176230
PMCPMC2694946
OpenAlexW2002757283

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.