Evidence map›Paper›PMID 19172406›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2009

Chromatin condensation in terminally differentiating mouse erythroblasts does not involve special architectural proteins but depends on histone deacetylation.

Evgenya Y Popova, Sharon Wald Krauss, Sarah A Short, Gloria Lee, Jonathan Villalobos, Joan Etzell, Mark J Koury, Paul A Ney, Joel Anne Chasis, Sergei A Grigoryev

Open access · greenAbstract read
In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 7 citations in OpenAlex.

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  9. Erythroblast enucleation at a glance.Journal of cell science · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Evgenya Y PopovaBiochemistry and Molecular Biology, College of Medicine, Penn State University, Hershey, PA 17033, USA.
Sharon Wald Krauss
Sarah A Short
Gloria Lee
Jonathan Villalobos
Joan Etzell
Mark J Koury
Paul A Ney
Joel Anne Chasis
Sergei A Grigoryev
Lawrence Berkeley National Laboratory · USPennsylvania State University · USSt. Jude Children's Research Hospital · USUniversity of California, San Francisco · USVA Tennessee Valley Healthcare System · US

Funding

YEAST MEMBRANE CYTOSKELETONP01DK032094 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI NARLA, MOHANDAS · 1987 to 2021
$26.7M
NOVEL FUNCTIONS OF RED CELL PROTEINS LU AND LWR01DK056267 · NIDDK · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI CHASIS, JOEL A · 2000 to 2010
$3.4M
ROLE OF FV2 IN ERYTHROPOIESISR01CA084214 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI NEY, PAUL A · 2000 to 2009
$2.4M
RED CELL CYTOSKELETAL PROTEIN 4.1 DURING CELL DIVISIONR01DK059079 · NIDDK · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, SHARON W · 2000 to 2008
$2.0M
NCI NIH HHS CA084214NCI NIH HHS R01 CA084214NIDDK NIH HHS DK32094NIDDK NIH HHS DK56267NIDDK NIH HHS DK59079NIDDK NIH HHS P01 DK032094NIDDK NIH HHS R01 DK056267NIDDK NIH HHS R01 DK059079
6 · The paper itself

Abstract

Terminal erythroid differentiation in vertebrates is characterized by progressive heterochromatin formation and chromatin condensation and, in mammals, culminates in nuclear extrusion. To date, although mechanisms regulating avian erythroid chromatin condensation have been identified, little is known regarding this process during mammalian erythropoiesis. To elucidate the molecular basis for mammalian erythroblast chromatin condensation, we used Friend virus-infected murine spleen erythroblasts that undergo terminal differentiation in vitro. Chromatin isolated from early and late-stage erythroblasts had similar levels of linker and core histones, only a slight difference in nucleosome repeats, and no significant accumulation of known developmentally regulated architectural chromatin proteins. However, histone H3(K9) dimethylation markedly increased while histone H4(K12) acetylation dramatically decreased and became segregated from the histone methylation as chromatin condensed. One histone deacetylase, HDAC5, was significantly upregulated during the terminal stages of Friend virus-infected erythroblast differentiation. Treatment with histone deacetylase inhibitor, trichostatin A, blocked both chromatin condensation and nuclear extrusion. Based on our data, we propose a model for a unique mechanism in which extensive histone deacetylation at pericentromeric heterochromatin mediates heterochromatin condensation in vertebrate erythroblasts that would otherwise be mediated by developmentally-regulated architectural proteins in nucleated blood cells.

Indexed as

AnimalsCell DifferentiationChickensChromatinErythroblastsFriend murine leukemia virusHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHydroxamic AcidsMiceNucleosomesChromatinHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHydroxamic AcidsNucleosomestrichostatin A

Identifiers

PMID19172406
PMCPMC2667965
OpenAlexW1498253630

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.