Evidence map›Paper›PMID 19171938›Full record

ArticleThe Journal of biological chemistry2009

Functional Interactions between Distinct Sodium Channel Cytoplasmic Domains through the Action of Calmodulin.

Franck Potet, Benjamin Chagot, Mircea Anghelescu, Prakash C Viswanathan, Svetlana Z Stepanovic, Sabina Kupershmidt, Walter J Chazin, Jeffrey R Balser

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 2 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 2 syntheses or guidelines pooled it, 83 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Biophysical mechanisms of myocardium sodium channelopathies.Pflugers Archiv : European journal of physiology · 2024
    Review
  5. Article
  6. Feedback contributions to excitation-contraction coupling in native functioning striated muscle.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  7. Article
  8. Article
  9. NaStructure (London, England : 1993) · 2021
    Article
  10. Review
  11. Review
  12. Calmodulin Interactions with Voltage-Gated Sodium Channels.International journal of molecular sciences · 2021
    Review
  13. Finite element analysis predicts CaScientific reports · 2021
    Article
  14. Elementary mechanisms of calmodulin regulation of NaProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Properties of Calmodulin Binding to NaNeurochemical research · 2021
    Article
  16. Sarcoplasmic reticular CaScientific reports · 2021
    Article
  17. Structural basis of cytoplasmic NaV1.5 and NaV1.4 regulation.The Journal of general physiology · 2021
    Review
  18. Crystal structures of CaProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. Mutations in NaFrontiers in physiology · 2019
    Article
  20. The Effect of CaInternational journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Franck PotetDepartments of Anesthesiology, Pharmacology, Medicine, Biochemistry, and Chemistry and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37232, USA. franck.potet@vanderbilt.edu
Benjamin Chagot
Mircea Anghelescu
Prakash C Viswanathan
Svetlana Z Stepanovic
Sabina Kupershmidt
Walter J Chazin
Jeffrey R Balser
Joint Center for Structural Genomics · USCardiovascular Institute of the South · USVanderbilt University · US

Funding

The Molecular Basis of Local AnesthesiaR01GM056307 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1997 to 2008
$2.6M
NIGMS NIH HHS GM56307-11
6 · The paper itself

Abstract

Sodium channels are fundamental signaling molecules in excitable cells, and are molecular targets for local anesthetic agents and intracellular free Ca(2+) ([Ca(2+)](i)). Two regions of Na(V)1.5 have been identified previously as [Ca(2+)](i)-sensitive modulators of channel inactivation. These include a C-terminal IQ motif that binds calmodulin (CaM) in different modes depending on Ca(2+) levels, and an immediately adjacent C-terminal EF-hand domain that directly binds Ca(2+). Here we show that a mutation of the IQ domain (A1924T; Brugada Syndrome) that reduces CaM binding stabilizes Na(V)1.5 inactivation, similarly and more extensively than even reducing [Ca(2+)](i). Because the DIII-DIV linker is an essential structure in Na(V)1.5 inactivation, we evaluated this domain for a potential CaM binding interaction. We identified a novel CaM binding site within the linker, validated its interaction with CaM by NMR spectroscopy, and revealed its micromolar affinity by isothermal titration calorimetry. Mutation of three consecutive hydrophobic residues (Phe(1520)-Ile(1521)-Phe(1522)) to alanines in this CaM-binding domain recapitulated the electrophysiology phenotype observed with mutation of the C-terminal IQ domain: Na(V)1.5 inactivation was stabilized; moreover, mutations of either CaM-binding domain abolish the well described stabilization of inactivation by lidocaine. The direct physical interaction of CaM with the C-terminal IQ domain and the DIII-DIV linker, combined with the similarity in phenotypes when CaM-binding sites in either domain are mutated, suggests these cytoplasmic structures could be functionally coupled through the action of CaM. These findings have bearing upon Na(+) channel function in genetically altered channels and under pathophysiologic conditions where [Ca(2+)](i) impacts cardiac conduction.

Indexed as

Amino Acid MotifsAmino Acid SubstitutionBrugada SyndromeCalciumCalmodulinCell LineCytoplasmHumansMuscle ProteinsMutation, MissenseNAV1.5 Voltage-Gated Sodium ChannelNuclear Magnetic Resonance, BiomolecularProtein StabilityProtein Structure, QuaternaryProtein Structure, TertiarySodium ChannelsCalciumCalmodulinMuscle ProteinsNAV1.5 Voltage-Gated Sodium ChannelSCN5A protein, humanSodium Channels

Identifiers

PMID19171938
PMCPMC2659242
OpenAlexW1992891836

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.