Evidence map›Paper›PMID 19171767›Full record

ArticleThe Journal of experimental medicine2009

Human CD4+ T cell recent thymic emigrants are identified by protein tyrosine kinase 7 and have reduced immune function.

Christopher J Haines, Thierry D Giffon, Li-Sheng Lu, Xiaowei Lu, Marc Tessier-Lavigne, Douglas T Ross, David B Lewis

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of experimental medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 188 citations in OpenAlex.

  1. Trial
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  14. Human CD4iScience · 2024
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. T cell regeneration after immunological injury.Nature reviews. Immunology · 2021
    Review
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Christopher J HainesDepartment of Pediatrics and the Immunology Program, Stanford University, Stanford, CA 94305, USA.
Thierry D Giffon
Li-Sheng Lu
Xiaowei Lu
Marc Tessier-Lavigne
Douglas T Ross
David B Lewis
Howard Hughes Medical Institute · US

Funding

MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
NIAID NIH HHS T32 AI007290
6 · The paper itself

Abstract

CD4(+) recent thymic emigrants (RTEs) comprise a clinically and immunologically important T cell population that indicates thymic output and that is essential for maintaining a diverse alphabeta-T cell receptor (TCR) repertoire of the naive CD4(+) T cell compartment. However, their frequency and function are poorly understood because no known surface markers distinguish them from older non-RTE naive CD4(+) T cells. We demonstrate that protein tyrosine kinase 7 (PTK7) is a novel marker for human CD4(+) RTEs. Consistent with their recent thymic origin, human PTK7(+) RTEs contained higher levels of signal joint TCR gene excision circles and were more responsive to interleukin (IL)-7 compared with PTK7(-) naive CD4(+) T cells, and rapidly decreased after complete thymectomy. Importantly, CD4(+) RTEs proliferated less and produced less IL-2 and interferon-gamma than PTK7(-) naive CD4(+) T cells after alphabeta-TCR/CD3 and CD28 engagement. This immaturity in CD4(+) RTE effector function may contribute to the reduced CD4(+) T cell immunity observed in contexts in which CD4(+) RTEs predominate, such as in the fetus and neonate or after immune reconstitution. The ability to identify viable CD4(+) RTEs by PTK7 staining should be useful for monitoring thymic output in both healthy individuals and in patients with genetic or acquired CD4(+) T cell immunodeficiencies.

Indexed as

Age FactorsAnimalsBiomarkersCD4-Positive T-LymphocytesCell Adhesion MoleculesCell MovementCHO CellsCricetinaeCricetulusDNA PrimersFlow CytometryHumansImmunity, CellularImmunophenotypingReceptor Protein-Tyrosine KinasesThymus GlandBiomarkersCell Adhesion MoleculesDNA PrimersPTK7 protein, humanReceptor Protein-Tyrosine Kinases

Identifiers

PMID19171767
PMCPMC2646563
OpenAlexW2112729981

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.