Evidence map›Paper›PMID 19171675›Full record

ArticleDrug metabolism and disposition: the biological fate of chemicals2009

Dual mechanisms of CYP3A protein regulation by proinflammatory cytokine stimulation in primary hepatocyte cultures.

Choon-Myung Lee, Jan Pohl, Edward T Morgan

Open access · bronzeAbstract read
In one paragraph

Article in Drug metabolism and disposition: the biological fate of chemicals, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 60 citations in OpenAlex.

  1. Trial
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  7. Sources of Interindividual Variability.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. The relationships between cytochromes P450 and HJournal of inorganic biochemistry · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Choon-Myung LeeDepartment of Pharmacology, Emory University School of Medicine, 5119 Rollins Research Center, 1510 Clifton Road, Atlanta, GA 30322, USA.
Jan Pohl
Edward T Morgan
Emory University · US

Funding

Regulation of CYP Proteins by Reactive Nitrogen SpeciesR01GM069971 · NIGMS · EMORY UNIVERSITY · PI MORGAN, EDWARD THOMAS · 2004 to 2017
$4.0M
MICROCHEMICAL ANALYSIS FACILITY FOR MOLECULAR BIOLOGYS10RR002878 · NCRR · EMORY UNIVERSITY · PI WALLACE, DOUGLAS C · 1986 to 1986
–
PROTEIN SEQUENCING HARDWARES10RR012878 · NCRR · EMORY UNIVERSITY · PI JENSEN, PETER E. · 1997 to 1997
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MASS SPECTROMETER--TRIPLE QUADRUPOLES10RR013948 · NCRR · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1999 to 1999
–
NCRR NIH HHS RR02878NCRR NIH HHS RR12878NCRR NIH HHS RR13948NIEHS NIH HHS T32-ES01287NIGMS NIH HHS GM069971NIGMS NIH HHS R01 GM069971
6 · The paper itself

Abstract

Whereas many cytochrome P450 enzymes are transcriptionally suppressed by inflammatory stimuli, down-regulation of CYP2B protein by the inflammatory cytokine interleukin (IL)-1beta is nitric oxide (NO)-dependent and occurs via polyubiquitination and proteasomal degradation. Here, we used iTRAQ proteomic analysis to search for other proteins that are potentially down-regulated by cellular NO in cultured rat hepatocytes, and we identified CYP3A1 as one such protein. Therefore, we examined whether CYP3A proteins, like CYP2B, undergo NO- and proteasome-dependent degradation in response to cytokine treatment of rat hepatocytes. In cultured rat hepatocytes treated with phenobarbital, IL-1beta stimulation failed to down-regulate CYP3A1 mRNA within 24 h of treatment, whereas CYP3A protein was down-regulated to 40% of control within 6 h, showing the post-transcriptional down-regulation of CYP3A1 protein. The down-regulation of CYP3A after 9 h of stimulation by IL-1beta was attenuated by inhibitors of NO synthase (NOS) and of the proteasome, showing NO- and proteasome-dependent down-regulation at earlier time points. However, the down-regulation of CYP3A evoked by IL-1beta measured 24 h after stimulation was not affected by the inhibition of NOS or by proteasomal inhibitors, showing that CYP3A1 down-regulation at later time points is NO- and proteasome-independent. IL-6, which did not evoke NO production nor affect CYP3A1 mRNA within 24 h, produced a delayed proteasome-independent down-regulation as well. Taken together, these observations show a novel dual mode of post-transcriptional CYP3A down-regulation by cytokines: NO- and proteasome-dependent at earlier time points and NO- and proteasome-independent at later times.

Indexed as

AnimalsBase SequenceCells, CulturedCytochrome P-450 CYP3ACytokinesDNA PrimersDown-RegulationHepatocytesInflammation MediatorsMaleNitric OxidePhenobarbitalProteomicsRatsRats, Sprague-DawleyReverse Transcriptase Polymerase Chain ReactionCytochrome P-450 CYP3ACytokinesDNA PrimersInflammation MediatorsNitric OxidePhenobarbitalRNA, Messenger

Identifiers

PMID19171675
PMCPMC2680532
OpenAlexW2152323715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.