Evidence map›Paper›PMID 19170886›Full record

ArticleMolecular microbiology2009

Acid stress activation of the sigma(E) stress response in Salmonella enterica serovar Typhimurium.

Cécile Muller, Iel-Soo Bang, Jyoti Velayudhan, Joyce Karlinsey, Kai Papenfort, Jörg Vogel, Ferric C Fang

Abstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

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  20. Site-2 protease substrate specificity and coupling in trans by a PDZ-substrate adapter protein.Proceedings of the National Academy of Sciences of the United States of America · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Cécile MullerDepartments of Laboratory Medicine, University o9f Washington School of Medicine, Seattle, WA 98121, USA.
Iel-Soo Bang
Jyoti Velayudhan
Joyce Karlinsey
Kai Papenfort
Jörg Vogel
Ferric C Fang
Max Planck Institute for Infection Biology · DE

Funding

THE SALMONELLA TYPHIMURIUM SIGMAE REGULONR01AI044486 · NIAID · UNIVERSITY OF WASHINGTON · PI FANG, FERRIC C · 1999 to 2016
$4.9M
NIAID NIH HHS AI44486NIAID NIH HHS R01 AI044486
6 · The paper itself

Abstract

The alternative sigma factor sigma(E) is activated by unfolded outer membrane proteins (OMPs) and plays an essential role in Salmonella pathogenesis. The canonical pathway of sigma(E) activation in response to envelope stress involves sequential proteolysis of the anti-sigma factor RseA by the PDZ proteases DegS and RseP. Here we show that sigma(E) in Salmonella enterica sv. Typhimurium can also be activated by acid stress. A sigma(E)-deficient mutant exhibits increased susceptibility to acid pH and reduced survival in an acidified phagosomal vacuole. Acid activation of sigma(E)-dependent gene expression is independent of the unfolded OMP signal or the DegS protease but requires processing of RseA by RseP. The RseP PDZ domain is indispensable for acid induction, suggesting that acid stress may disrupt an inhibitory interaction between RseA and the RseP PDZ domain to allow RseA proteolysis in the absence of antecedent action of DegS. These observations demonstrate a novel environmental stimulus and activation pathway for the sigma(E) regulon that appear to be critically important during Salmonella-host cell interactions.

Indexed as

AcidsAnimalsBacterial ProteinsCell LineGene Expression Regulation, BacterialHydrogen-Ion ConcentrationMiceMutationRegulonRNA, BacterialSalmonella typhimuriumSigma FactorStress, PhysiologicalVacuolesAcidsBacterial ProteinsDegS protein, BacteriaRNA, BacterialsigE protein, BacteriaSigma Factor

Identifiers

PMID19170886
PMCPMC4157319
OpenAlexW2105592847

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.