Evidence map›Paper›PMID 19168755›Full record

ArticleEukaryotic cell2009

Dual sorting of the Saccharomyces cerevisiae vacuolar protein Sna4p.

W Pokrzywa, B Guerriat, J Dodzian, P Morsomme

Abstract read
In one paragraph

Article in Eukaryotic cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. ESCRT machinery plays a role in microautophagy in yeast.BMC molecular and cell biology · 2020
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

W PokrzywaUniversité Catholique de Louvain, Institut des Sciences de la Vie, Unité de Biochimie Physiologique, Place Croix du Sud 5/15, B-1348 Louvain-La-Neuve, Belgium.
B Guerriat
J Dodzian
P Morsomme

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sna4p, a vacuolar membrane protein, belongs to a small family of proteins conserved in plants and fungi. It is transported to the vacuolar membrane via the alkaline phosphatase (ALP) pathway, which bypasses the multivesicular bodies (MVBs). Here, we show that transfer of Sna4p by the ALP route involves the AP-3 adaptor protein complex, which binds to an acidic dileucine sorting signal in the cytoplasmic region of Sna4p. In addition, Sna4p can use the MVB pathway by using a PPPY motif, which is involved in the interaction with ubiquitin ligase Rsp5p. Deletion or mutation of the Sna4p PPPY motif or a low level of Rsp5p inhibits the entrance of Sna4p into MVBs. Sna4p is polyubiquitylated on its only lysine, and Sna4p lacking this lysine shows defective MVB sorting. These data indicate that Sna4p has two functional motifs, one for interaction with the AP-3 complex, followed by entry into the ALP pathway, and one for binding Rsp5p, which directs the protein to the MVB pathway. The presence of these two motifs allows Sna4p to localize to both the vacuolar membrane and the lumen.

Indexed as

Amino Acid MotifsAmino Acid SequenceEndosomal Sorting Complexes Required for TransportEndosomesMembrane ProteinsMolecular Sequence DataMutationProtein Sorting SignalsProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitin-Protein Ligase ComplexesEndosomal Sorting Complexes Required for TransportMembrane ProteinsProtein Sorting SignalsRSP5 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSNA4 protein, S cerevisiaeUbiquitin-Protein Ligase Complexes

Identifiers

PMID19168755
PMCPMC2653246

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.