Evidence map›Paper›PMID 19166355›Full record

ArticleBiochemistry2009

Coordinating the two protomer active sites of human topoisomerase IIalpha: nicks as topoisomerase II poisons.

Joseph E Deweese, Neil Osheroff

Abstract read
In one paragraph

Article in Biochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. DNA topoisomerases as molecular targets for anticancer drugs.Journal of enzyme inhibition and medicinal chemistry · 2020
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. DNA cleavage and opening reactions of human topoisomerase IIα are regulated via Mg2+-mediated dynamic bending of gate-DNA.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  11. Review
  12. Article
  13. Article
  14. The use of divalent metal ions by type II topoisomerases.Metallomics : integrated biometal science · 2010
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Joseph E DeweeseDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-0146, USA.
Neil Osheroff

Funding

MULTIDISCIPLINARY BASIC RESEARCH TRAINING IN CANCERT32CA009592 · NCI · VANDERBILT UNIVERSITY · PI Justin M Balko, Julie A Rhoades (Sterling) · 1987 to 2026
$10.4M
FUNCTION AND BIOLOGY OF EUKARYOTIC DNA TOPOISOMERASESR01GM033944 · NIGMS · VANDERBILT UNIVERSITY · PI OSHEROFF, NEIL · 1985 to 2015
$5.5M
DNA LESIONS AS ENDOGENOUS TOPOISOMERASE POISONSR01GM053960 · NIGMS · VANDERBILT UNIVERSITY · PI OSHEROFF, NEIL · 1996 to 2009
$2.2M
NCI NIH HHS T32 CA009592NCI NIH HHS T32CA09592NIGMS NIH HHS GM33944NIGMS NIH HHS GM53960NIGMS NIH HHS R01 GM033944NIGMS NIH HHS R01 GM053960
6 · The paper itself

Abstract

Topoisomerase II modulates DNA topology by generating double-stranded breaks in DNA. Results of the current study indicate that the presence of a nick at one scissile bond dramatically increases the rate of cleavage by human topoisomerase IIalpha at the scissile bond on the opposite strand. We propose that this enhanced activity at the second strand coordinates the two protomer subunits of topoisomerase II and allows the enzyme to create double-stranded breaks. Finally, the presence of a nick on one strand induces cleavage on the opposite strand. Thus, nicks are topoisomerase II poisons that generate novel sites of DNA cleavage.

Indexed as

Antigens, NeoplasmCatalytic DomainDNA-Binding ProteinsDNA DamageDNA Topoisomerases, Type IIHumansTopoisomerase II InhibitorsAntigens, NeoplasmDNA-Binding ProteinsDNA Topoisomerases, Type IITopoisomerase II Inhibitors

Identifiers

PMID19166355
PMCPMC2716134

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.