Evidence map›Paper›PMID 19165721›Full record

ArticleProtein science : a publication of the Protein Society2009

Genetic selection system for improving recombinant membrane protein expression in E. coli.

Elizabeth Massey-Gendel, Anni Zhao, Gabriella Boulting, Hye-Yeon Kim, Michael A Balamotis, Len M Seligman, Robert K Nakamoto, James U Bowie

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 61 citations in OpenAlex.

  1. Exploring the repertoire of rhomboid proteases inFrontiers in cellular and infection microbiology · 2026
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  10. Isolating Escherichia coli strains for recombinant protein production.Cellular and molecular life sciences : CMLS · 2017
    Review
  11. Article
  12. Article
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  14. Article
  15. Membrane proteins can have high kinetic stability.Journal of the American Chemical Society · 2013
    Article
  16. Article
  17. Combinatorial approaches for inverse metabolic engineering applications.Computational and structural biotechnology journal · 2012
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Elizabeth Massey-GendelDepartment of Chemistry and Biochemistry, University of California, Los Angeles, USA.
Anni Zhao
Gabriella Boulting
Hye-Yeon Kim
Michael A Balamotis
Len M Seligman
Robert K Nakamoto
James U Bowie
University of California, Los Angeles · USPomona College · USUniversity of Virginia · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Generation of Membrane Protein Production Strains(RMI)R01GM075922 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOWIE, JAMES U · 2005 to 2009
$1.2M
NIGMS NIH HHS GM07185NIGMS NIH HHS R01 GM075922
6 · The paper itself

Abstract

A major barrier to the physical characterization and structure determination of membrane proteins is low yield in recombinant expression. To address this problem, we have designed a selection strategy to isolate mutant strains of Escherichia coli that improve the expression of a targeted membrane protein. In this method, the coding sequence of the membrane protein of interest is fused to a C-terminal selectable marker, so that the production of the selectable marker and survival on selective media is linked to expression of the targeted membrane protein. Thus, mutant strains with improved expression properties can be directly selected. We also introduce a rapid method for curing isolated strains of the plasmids used during the selection process, in which the plasmids are removed by in vivo digestion with the homing endonuclease I-CreI. We tested this selection system on a rhomboid family protein from Mycobacterium tuberculosis (Rv1337) and were able to isolate mutants, which we call EXP strains, with up to 75-fold increased expression. The EXP strains also improve the expression of other membrane proteins that were not the target of selection, in one case roughly 90-fold.

Indexed as

Bacterial ProteinsCloning, MolecularDNA Restriction EnzymesElectrophoresis, Polyacrylamide GelEscherichia coliMembrane ProteinsMutationMycobacterium tuberculosisPlasmidsRecombinant ProteinsBacterial ProteinsDNA Restriction Enzymesendodeoxyribonuclease CreIMembrane ProteinsRecombinant Proteins

Identifiers

PMID19165721
PMCPMC2708063
OpenAlexW2136704670

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.