Evidence map›Paper›PMID 19164451›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2009

Alternative splicing of the murine receptor for advanced glycation end-products (RAGE) gene.

Anastasia Z Kalea, Nina Reiniger, Hojin Yang, Maria Arriero, Ann Marie Schmidt, Barry I Hudson

Open access · greenAbstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
8.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 111 citations in OpenAlex.

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  13. RAGE Signaling in Melanoma Tumors.International journal of molecular sciences · 2020
    Review
  14. Article
  15. Review
  16. Article
  17. Promoter methylation cooperates with SNPs to modulateBiochemistry and biophysics reports · 2019
    Article
  18. RAGE Signaling in Skeletal Biology.Current osteoporosis reports · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Anastasia Z KaleaDivision of Surgical Science, Dept. of Surgery, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Nina Reiniger
Hojin Yang
Maria Arriero
Ann Marie Schmidt
Barry I Hudson
Columbia University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The alternative splicing of pre-mRNAs is a critical mechanism in genomic complexity, disease, and development. Studies of the receptor for advanced glycation end-products (RAGE) indicate that this gene undergoes a variety of splice events in humans. However, no studies have extensively analyzed the tissue distribution in other species or compared evolutionary differences of RAGE isoforms. Because the majority of studies probing RAGE function have been performed in murine models, we therefore performed studies to identify and characterize the splice variants of the murine RAGE gene, and we compared these to human isoforms. Here, using mouse tissues, we identified numerous splice variants including changes in the extracellular domain or the removal of the transmembrane and cytoplasmic domains, which produce soluble splice isoforms. Comparison of splice variants between humans and mice revealed homologous regions in the RAGE gene that undergo splicing as well as key species-specific mechanisms of splicing. Further analysis of tissue splice variant distribution in mice revealed major differences between lung, kidney, heart, and brain. To probe the potential impact of disease-like pathological states, we studied diabetic mice and report that RAGE splice variation changed dramatically, resulting in an increase in production of soluble RAGE (sRAGE) splice variants, which were not associated with detectable levels of sRAGE in murine plasma. In conclusion, we have determined that the murine RAGE gene undergoes extensive splicing with distinct splice isoforms being uniquely distributed in different tissues. These differences in RAGE splicing in both physiological and pathogenic states further expand our understanding of the biological repertoire of this receptor in health and disease.

Indexed as

Alternative SplicingAnimalsBase SequenceComputational BiologyFemaleGlycation End Products, AdvancedHumansMaleMiceMolecular Sequence DataProtein IsoformsReceptor for Advanced Glycation End ProductsReceptors, ImmunologicSequence Homology, Nucleic AcidTissue DistributionGlycation End Products, AdvancedProtein IsoformsReceptor for Advanced Glycation End ProductsReceptors, Immunologic

Identifiers

PMID19164451
PMCPMC2698653
OpenAlexW1987703665

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.