Evidence map›Paper›PMID 19162550›Full record

ReviewTrends in molecular medicine2009

What are microarrays teaching us about sleep?

Miroslaw Mackiewicz, John E Zimmerman, Keith R Shockley, Gary A Churchill, Allan I Pack

Open access · greenAbstract readReview
In one paragraph

Review in Trends in molecular medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 71 citations in OpenAlex.

  1. Trial
  2. Effects of insufficient sleep on circadian rhythmicity and expression amplitude of the human blood transcriptome.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Trial
  3. Article
  4. Review
  5. Article
  6. Review
  7. Unique transcriptional signatures of sleep loss across independently evolved cavefish populations.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2020
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Molecular Mechanisms of Sleep Homeostasis in Flies and Mammals.Cold Spring Harbor perspectives in biology · 2017
    Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Miroslaw MackiewiczUniversity of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
John E Zimmerman
Keith R Shockley
Gary A Churchill
Allan I Pack
University of Pennsylvania · USJackson Laboratory · US

Funding

MOUSE MODELS OF HEART, LUNG AND BLOOD DISEASEU01HL066611 · NHLBI · JACKSON LABORATORY · PI PETERS, LUANNE L · 2000 to 2007
$25.4M
THE ROLE OF SLEEP IN MEMORY STORAGEP01AG017628 · NIA · UNIVERSITY OF PENNSYLVANIA · PI PACK, ALLAN I · 2001 to 2017
$19.2M
SCOR IN NEUROBIOLOGY SLEEP AND SLEEP APNEAP50HL060287 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI DAVIES, RICHARD O · 1998 to 2007
$17.2M
ANOVA-Based Approaches to Time-Series Microarray DataF32HG003968 · NHGRI · JACKSON LABORATORY · PI SHOCKLEY, KEITH R · 2005 to 2007
$142k
NHGRI NIH HHS F32 HG003968NHGRI NIH HHS HG003968NHLBI NIH HHS HL60287NHLBI NIH HHS HL66611NHLBI NIH HHS P50 HL060287NHLBI NIH HHS U01 HL066611NIA NIH HHS AG17628NIA NIH HHS P01 AG017628
6 · The paper itself

Abstract

Many fundamental questions about sleep remain unanswered. The presence of sleep across phyla suggests that it must serve a basic cellular and/or molecular function. Microarray studies, performed in several model systems, have identified classes of genes that are sleep-state regulated. This has led to the following concepts: first, a function of sleep is to maintain synaptic homeostasis; second, sleep is a stage of macromolecule biosynthesis; third, extending wakefulness leads to downregulation of several important metabolic pathways; and, fourth, extending wakefulness leads to endoplasmic reticulum stress. In human studies, microarrays are being applied to the identification of biomarkers for sleepiness and for the common debilitating condition of obstructive sleep apnea.

Indexed as

Microarray AnalysisModels, BiologicalGene Expression ProfilingGenetic VariationHumansQuantitative Trait LociSleepSleep Wake DisordersWakefulness

Identifiers

PMID19162550
PMCPMC2942088
OpenAlexW2018107046

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.