Evidence map›Paper›PMID 19161244›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2009

Small interfering peptide (siP) for in vivo examination of the developing lung interactonome.

J Craig Cohen, Erin Killeen, Avinash Chander, Ken-Ichi Takemaru, Janet E Larson, Kate J Treharne, Anil Mehta

Open access · greenAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. CFTR mutations altering CFTR fragmentation.The Biochemical journal · 2013
    Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

J Craig CohenThe Brady Laboratory, Section of Neonatology, Department of Pediatrics, Stony Brook University, School of Medicine, Stony Brook, New York 11794, USA. jcraig.cohen@stonybrook.edu
Erin Killeen
Avinash Chander
Ken-Ichi Takemaru
Janet E Larson
Kate J Treharne
Anil Mehta
Stony Brook University · USNinewells Hospital · GBUniversity of Dundee · GB

Funding

LUNG SURFACTANT SECRETION AND MEMBRANE FUSIONR01HL049959 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI CHANDER, AVINASH · 1994 to 2011
$3.4M
Role of Beta-Catenin Antagonist Chibby in AdipogenesisR01DK073191 · NIDDK · STATE UNIVERSITY NEW YORK STONY BROOK · PI TAKEMARU, KEN-ICHI · 2006 to 2010
$1.5M
NHLBI NIH HHS HL49959NIDDK NIH HHS R01 DK073191Wellcome TrustWellcome Trust 079965/Z/06/Z
6 · The paper itself

Abstract

To understand the role of reactive oxygen species in mechanosensory control of lung development a new approach to interfere with protein-protein interactions by means of a short interacting peptide was developed. This technology was used in the developing rodent lung to examine the role of NADPH oxidase (NOX), casein kinase 2 (CK2), and the cystic fibrosis transmembrane conductance regulator (CFTR) in stretch-induced differentiation. Interactions between these molecules was targeted in an in utero system with recombinant adeno-associated virus (rAAV) containing inserted DNA sequences that express a control peptide or small interfering peptides (siPs) specific for subunit interaction or phosphorylation predicted to be necessary for multimeric enzyme formation. In all cases only siPs with sequences necessary for a predicted normal function were found to interfere with assembly of the multimeric enzyme. A noninterfering control siP to nonessential regions or reporter genes alone had no effect. Physiologically, it was shown that siPs that interfered with the NOX-CFTR-CK2 complex that we call an "interactonome" affected markers of stretch-induced lung organogenesis including Wnt/beta-catenin signaling.

Indexed as

Amino Acid SequenceAnimalsbeta CateninCasein Kinase IICystic Fibrosis Transmembrane Conductance RegulatorDependovirusLungMiceMolecular Sequence DataNADPH OxidasesPeptidesPhosphorylationProtein BindingProtein MultimerizationRatsReactive Oxygen Speciesbeta CateninCasein Kinase IICystic Fibrosis Transmembrane Conductance RegulatorNADPH OxidasesPeptidesReactive Oxygen SpeciesWnt Proteins

Identifiers

PMID19161244
PMCPMC2808203
OpenAlexW2055076423

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.