Evidence map›Paper›PMID 19159265›Full record

ArticleBiochemistry2009

Subunit structure of benzylsuccinate synthase.

Lei Li, Dustin P Patterson, Christel C Fox, Brian Lin, Peter W Coschigano, E Neil G Marsh

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

  1. The structural basis of malodorant skatole formation by the glycyl radical enzyme indoleacetate decarboxylase.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Structural basis for anaerobic alkane activation by a multisubunit glycyl radical enzyme.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Anaerobic benzene oxidation inApplied and environmental microbiology · 2024
    Article
  8. Development of aniScience · 2023
    Article
  9. Article
  10. Solution structure and biochemical characterization of a spare part protein that restores activity to an oxygen-damaged glycyl radical enzyme.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2019
    Article
  11. New tricks for the glycyl radical enzyme family.Critical reviews in biochemistry and molecular biology · 2017
    Review
  12. Article
  13. Article
  14. Article
  15. Structures of benzylsuccinate synthase elucidate roles of accessory subunits in glycyl radical enzyme activation and activity.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Review
  17. Review
  18. 4-Hydroxyphenylacetate decarboxylase activating enzyme catalyses a classical S-adenosylmethionine reductive cleavage reaction.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2013
    Article
  19. Identification of FeS clusters in the glycyl-radical enzyme benzylsuccinate synthase via EPR and Mössbauer spectroscopy.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2012
    Article
  20. Adenosyl radical: reagent and catalyst in enzyme reactions.Chembiochem : a European journal of chemical biology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Lei LiDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, USA.
Dustin P Patterson
Christel C Fox
Brian Lin
Peter W Coschigano
E Neil G Marsh
Ohio University · USUniversity of Michigan–Ann Arbor · US

Funding

MICHIGAN CHEMISTRY-BIOLOGY INTERFACE TRAINING PROGRAMT32GM008597 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MONTGOMERY, JOHN · 1996 to 2018
$5.0M
Understanding hydrogen atom transfer reactions in enzymesR01GM093088 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARSH, E NEIL · 2010 to 2023
$3.5M
HOW DO ENZYMES GENERATE AND CONTROL FREE RADICALSR01GM059227 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARSH, E NEIL · 1999 to 2007
$2.0M
Enzyme Catalysis of Toluene Degradation and Unusual DNA Photoproduct RepairK99ES017177 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LI, LEI · 2008 to 2009
$167k
NIEHS NIH HHS K99 ES 017177NIEHS NIH HHS K99 ES017177NIGMS NIH HHS GM 59227NIGMS NIH HHS R01 GM059227NIGMS NIH HHS R01 GM093088NIGMS NIH HHS T32 GM008597
6 · The paper itself

Abstract

Benzylsuccinate synthase is a member of the glycyl radical family of enzymes. It catalyzes the addition of toluene to fumarate to form benzylsuccinate as the first step in the anaerobic pathway of toluene fermentation. The enzyme comprises three subunits, alpha, beta, and gamma, that in Thauera aromatica strain T1 are encoded by the tutD, tutG, and tutF genes, respectively. The large alpha-subunit contains the essential glycine and cysteine residues that are conserved in all glycyl radical enzymes. However, the function of the small beta- and gamma-subunits has remained unclear. We have overexpressed all three subunits of benzylsuccinate synthase in Escherichia coli, both individually and in combination. Coexpression of the gamma-subunit (but not the beta-subunit) is essential for efficient expression of the alpha-subunit. The benzylsuccinate synthase complex lacking the glycyl radical could be purified as an alpha(2)beta(2)gamma(2) hexamer by nickel affinity chromatography through a "His(6)" affinity tag engineered onto the C-terminus of the alpha-subunit. Unexpectedly, BSS was found to contain two iron-sulfur clusters, one associated with the beta-subunit and the other with the gamma-subunit that appear to be necessary for the structural integrity of the complex. The spectroscopic properties of these clusters suggest that they are most likely [4Fe-4S] clusters. Removal of iron with chelating agents results in dissociation of the complex; similarly, a mutant gamma-subunit lacking the [4Fe-4S] cluster is unable to stabilize the alpha-subunit when the proteins are coexpressed.

Indexed as

BiocatalysisCarbon-Carbon LyasesElectron Spin Resonance SpectroscopyGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenes, BacterialIronIron Chelating AgentsIron-Sulfur ProteinsModels, MolecularMutationOxidation-ReductionProtein SubunitsSpectrophotometry, UltravioletThauerabenzylsuccinate synthaseCarbon-Carbon LyasesIronIron Chelating AgentsIron-Sulfur ProteinsProtein Subunits

Identifiers

PMID19159265
PMCPMC2820103
OpenAlexW1971380988

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.