Evidence map›Paper›PMID 19158664›Full record

ArticleThe EMBO journal2009

Smc5/6 maintains stalled replication forks in a recombination-competent conformation.

Anja Irmisch, Eleni Ampatzidou, Ken'ichi Mizuno, Matthew J O'Connell, Johanne M Murray

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 107 citations in OpenAlex.

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  11. International journal of molecular sciences · 2023
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  16. Loss of NSE-4 Perturbs Genome Stability and DNA Repair inInternational journal of molecular sciences · 2022
    Article
  17. Smc5/6 Complex Promotes Rad3Molecular and cellular biology · 2022
    Article
  18. Article
  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Anja IrmischGenome Damage and Stability Centre, University of Sussex, Brighton, E. Sussex, UK.
Eleni Ampatzidou
Ken'ichi Mizuno
Matthew J O'Connell
Johanne M Murray
University of Sussex · GBIcahn School of Medicine at Mount Sinai · US

Funding

Chk1 signaling in the G2 DNA damage checkpointR01CA100076 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI O'CONNELL, MATTHEW J · 2003 to 2007
$1.7M
Chk1 signaling in the G2 DNA damage checkpointR56CA100076 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI O'CONNELL, MATTHEW J · 2009 to 2009
$336k
Biotechnology and Biological Sciences Research CouncilCancer Research UKNCI NIH HHS CA100076NCI NIH HHS R01 CA100076NCI NIH HHS R56 CA100076
6 · The paper itself

Abstract

The Smc5/6 structural maintenance of chromosomes complex is required for efficient homologous recombination (HR). Defects in Smc5/6 result in chromosome mis-segregation and fragmentation. By characterising two Schizosaccharomyces pombe smc6 mutants, we define two separate functions for Smc5/6 in HR. The first represents the previously described defect in processing recombination-dependent DNA intermediates when replication forks collapse, which leads to increased rDNA recombination. The second novel function defines Smc5/6 as a positive regulator of recombination in the rDNA and correlates mechanistically with a requirement to load RPA and Rad52 onto chromatin genome-wide when replication forks are stably stalled by nucleotide depletion. Rad52 is required for all HR repair, but Rad52 loading in response to replication fork stalling is unexpected and does not correlate with damage-induced foci. We propose that Smc5/6 is required to maintain stalled forks in a stable recombination-competent conformation primed for replication restart.

Indexed as

Cell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneDNA DamageDNA ReplicationMutationNucleic Acid ConformationRad52 DNA Repair and Recombination ProteinRecombination, GeneticSchizosaccharomycesSchizosaccharomyces pombe ProteinsCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneRad52 DNA Repair and Recombination ProteinSchizosaccharomyces pombe ProteinsSmc5 protein, S pombesmc6 protein, S pombe

Identifiers

PMID19158664
PMCPMC2634738
OpenAlexW2039405875

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.