Evidence map›Paper›PMID 19158248›Full record

ArticleJournal of virology2009

Differential neutralization of human immunodeficiency virus (HIV) replication in autologous CD4 T cells by HIV-specific cytotoxic T lymphocytes.

Huabiao Chen, Alicja Piechocka-Trocha, Toshiyuki Miura, Mark A Brockman, Boris D Julg, Brett M Baker, Alissa C Rothchild, Brian L Block, Arne Schneidewind, Tomohiko Koibuchi and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 85 citations in OpenAlex.

  1. Trial
  2. HLA-B*14:02-Restricted Env-Specific CD8Journal of virology · 2017
    Trial
  3. Trial
  4. Trial
  5. Trial
  6. Trial
  7. Article
  8. Article
  9. The role of CD38 in HIV infection.AIDS research and therapy · 2021
    Review
  10. Article
  11. Article
  12. Immune Control of HIV.Journal of life sciences (Westlake Village, Calif.) · 2019
    Article
  13. Harnessing CD8Frontiers in immunology · 2019
    Review
  14. Mechanisms of CD8European journal of immunology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. HIV-specific CD8⁺ T cells and HIV eradication.The Journal of clinical investigation · 2016
    Review
  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Huabiao ChenRagon Institute of MGH, MIT and Harvard, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02129, USA.
Alicja Piechocka-Trocha
Toshiyuki Miura
Mark A Brockman
Boris D Julg
Brett M Baker
Alissa C Rothchild
Brian L Block
Arne Schneidewind
Tomohiko Koibuchi
Florencia Pereyra
Todd M Allen
Bruce D Walker
Harvard University · USRagon Institute of MGH, MIT and Harvard · USHoward Hughes Medical Institute · US

Funding

The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
INHIBITION OF HIV1 REPLICATION BY CYTOTOXIC LYMPHOCYTESR01AI030914 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI WALKER, BRUCE D · 1991 to 2013
$4.2M
Howard Hughes Medical InstituteNIAID NIH HHS P30 AI060354NIAID NIH HHS R01 AI030914
6 · The paper itself

Abstract

Defining the antiviral efficacy of CD8 T cells is important for immunogen design, and yet most current assays do not measure the ability of responses to neutralize infectious virus. Here we show that human immunodeficiency virus (HIV)-specific cytotoxic T-lymphocyte (CTL) clones and cell lines derived from infected persons and targeting diverse epitopes differ by over 1,000-fold in their ability to retard infectious virus replication in autologous CD4 T cells during a 7-day period in vitro, despite comparable activity as assessed by gamma interferon (IFN-gamma) enzyme-linked immunospot (ELISPOT) assay. Cell lines derived from peripheral blood mononuclear cells stimulated in vitro with peptides representing targeted Gag epitopes consistently neutralized HIV better than Env-specific lines from the same person, although ineffective inhibition of virus replication is not a universal characteristic of Env-specific responses at the clonal level. Gag-specific cell lines were of higher avidity than Env-specific lines, although avidity did not correlate with the ability of Gag- or Env-specific lines to contain HIV replication. The greatest inhibition was observed with cell lines restricted by the protective HLA alleles B*27 and B*57, but stimulation with targeted Gag epitopes resulted in greater inhibition than did stimulation with targeted Env epitopes even in non-B*27/B*57 subjects. These results assessing functional virus neutralization by HIV-specific CD8 T cells indicate that there are marked epitope- and allele-specific differences in virus neutralization by in vitro-expanded CD8 T cells, a finding not revealed by standard IFN-gamma ELISPOT assay currently in use in vaccine trials, which may be of critical importance in immunogen design and testing of candidate AIDS vaccines.

Indexed as

AllelesCD4-Positive T-LymphocytesCells, CulturedCytokinesEnzyme-Linked Immunosorbent AssayEpitopes, T-LymphocyteHIVHLA AntigensHumansLymphocyte ActivationT-Lymphocytes, CytotoxicCytokinesEpitopes, T-LymphocyteHLA Antigens

Identifiers

PMID19158248
PMCPMC2655558
OpenAlexW2116113310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.