Evidence map›Paper›PMID 19156209›Full record

ArticlePloS one2009

Proteomic-based detection of a protein cluster dysregulated during cardiovascular development identifies biomarkers of congenital heart defects.

Anjali K Nath, Michael Krauthammer, Puyao Li, Eugene Davidov, Lucas C Butler, Joshua Copel, Mikko Katajamaa, Matej Oresic, Irina Buhimschi, Catalin Buhimschi and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 39 citations in OpenAlex.

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  9. Notch signaling and cardiac repair.Journal of molecular and cellular cardiology · 2012
    Review
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  14. Review
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  16. Article
  17. Hierarchical approaches for systems modeling in cardiac development.Wiley interdisciplinary reviews. Systems biology and medicine
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Anjali K NathDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, United States of America. anjali.nath@aya.yale.edu
Michael Krauthammer
Puyao Li
Eugene Davidov
Lucas C Butler
Joshua Copel
Mikko Katajamaa
Matej Oresic
Irina Buhimschi
Catalin Buhimschi
Michael Snyder
Joseph A Madri
Yale University · USVTT Technical Research Centre of Finland · FI

Funding

Human Genome Array: Technology for Functional AnalysisP50HG002357 · NHGRI · YALE UNIVERSITY · PI SNYDER, MICHAEL P. · 2001 to 2010
$31.9M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007499 · NIGMS · YALE UNIVERSITY · PI CARLSON, JOHN R, REINKE, VALERIE J · 1985 to 2022
$13.9M
PATHOLOGY OF ENDOTHELIAL NEOVASCULARIZATIONR37HL028373 · NHLBI · YALE UNIVERSITY · PI MADRI, JOSEPH A · 1999 to 2008
$4.6M
THE PATHOLOGY OF ENDOTHELIAL NEOVASCULIZATIONR01HL028373 · NHLBI · YALE UNIVERSITY · PI MADRI, JOSEPH A · 1985 to 1998
–
NHGRI NIH HHS HG02357NHGRI NIH HHS P50 HG002357NHLBI NIH HHS NIHR37HL28373NHLBI NIH HHS R37 HL028373NIGMS NIH HHS 5 T32 GM07499NIGMS NIH HHS T32 GM007499
6 · The paper itself

Abstract

backgroundCardiovascular development is vital for embryonic survival and growth. Early gestation embryo loss or malformation has been linked to yolk sac vasculopathy and congenital heart defects (CHDs). However, the molecular pathways that underlie these structural defects in humans remain largely unknown hindering the development of molecular-based diagnostic tools and novel therapies. METHODOLOGY/PRINCIPAL

findingsMurine embryos were exposed to high glucose, a condition known to induce cardiovascular defects in both animal models and humans. We further employed a mass spectrometry-based proteomics approach to identify proteins differentially expressed in embryos with defects from those with normal cardiovascular development. The proteins detected by mass spectrometry (WNT16, ST14, Pcsk1, Jumonji, Morca2a, TRPC5, and others) were validated by Western blotting and immunoflorescent staining of the yolk sac and heart. The proteins within the proteomic dataset clustered to adhesion/migration, differentiation, transport, and insulin signaling pathways. A functional role for several proteins (WNT16, ADAM15 and NOGO-A/B) was demonstrated in an ex vivo model of heart development. Additionally, a successful application of a cluster of protein biomarkers (WNT16, ST14 and Pcsk1) as a prenatal screen for CHDs was confirmed in a study of human amniotic fluid (AF) samples from women carrying normal fetuses and those with CHDs. CONCLUSIONS/SIGNIFICANCE: The novel finding that WNT16, ST14 and Pcsk1 protein levels increase in fetuses with CHDs suggests that these proteins may play a role in the etiology of human CHDs. The information gained through this bed-side to bench translational approach contributes to a more complete understanding of the protein pathways dysregulated during cardiovascular development and provides novel avenues for diagnostic and therapeutic interventions, beneficial to fetuses at risk for CHDs.

Indexed as

Gene Expression Regulation, DevelopmentalAmniotic FluidAnimalsBiomarkersCardiovascular SystemChromatography, LiquidFemaleGlucoseHeart Defects, CongenitalHumansMass SpectrometryMiceNitric OxidePregnancyProteomicsBiomarkersGlucoseNitric Oxide

Identifiers

PMID19156209
PMCPMC2626248
OpenAlexW2024825326

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.