Evidence map›Paper›PMID 19155440›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2009

Meta association of colorectal cancer confirms risk alleles at 8q24 and 18q21.

Karen Curtin, Wei-Yu Lin, Rina George, Mark Katory, Jennifer Shorto, Lisa A Cannon-Albright, D Timothy Bishop, Angela Cox, Nicola J Camp, Colorectal Cancer Study Group

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 13 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 13 pooled it
7.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 13 syntheses or guidelines pooled it, 82 citations in OpenAlex.

  1. Pooled it
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  6. Common variation rs6983267 at 8q24.1 and risk of colorectal adenoma and cancer: evidence based on 31 studies.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  7. SMAD7 rs12953717 polymorphism contributes to increased risk of colorectal cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
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  12. Characterization of 9p24 risk locus and colorectal adenoma and cancer: gene-environment interaction and meta-analysis.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2010
    Pooled it
  13. Genetic variants in XRCC2: new insights into colorectal cancer tumorigenesis.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2009
    Pooled it
  14. Cell cycle (Georgetown, Tex.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Karen CurtinGenetic Epidemiology, University of Utah School of Medicine, Salt Lake City, UT 84109, USA. karen.curtin@hsc.utah.edu
Wei-Yu Lin
Rina George
Mark Katory
Jennifer Shorto
Lisa A Cannon-Albright
D Timothy Bishop
Angela Cox
Nicola J Camp
Colorectal Cancer Study Group
University of Utah · USUniversity of Leeds · GB

Funding

GENETIC ANALYSIS TECHNIQUES FOR COMMON CANCERSK07CA098364 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2004 to 2008
$701k
Transferability of Tagging-SNPs across disease status: colon cancer and XRCC2R03CA123550 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2006 to 2007
$147k
Cancer Research UK 10589Cancer Research UK A4994Cancer Research UK C588/A4994NCI NIH HHS CA123550NCI NIH HHS CA98364NCI NIH HHS K07 CA098364NCI NIH HHS N01 PC035141NCI NIH HHS N01-PC-35141NCI NIH HHS R03 CA123550
6 · The paper itself

Abstract

backgroundGenome-wide association studies of colorectal cancer (CRC) have identified genetic variants that reproducibly associate with CRC. Associations of 12 single nucleotide polymorphisms at 8q24, 9p24, and 18q21 (SMAD7) and CRC were investigated in a three-center collaborative study including two U.K. case-control cohorts (Sheffield and Leeds) and a U.S. case-control study of CRC cases from high-risk Utah pedigrees.

methodsOur combined resource included 1,092 CRC case subjects and 1,060 age- and sex-matched controls. Meta statistics and Monte Carlo significance testing using Genie software provided a valid combined analysis of our mixed independent and related case-control resource. We also evaluated whether these associations differed by sex, age at diagnosis, family history, or tumor site.

resultsAt 8q24, we observed two independent significant associations at single nucleotide polymorphisms located in two different risk regions of 8q24: rs6983267 in region 3 [P(trend) = 0.01; per allele odds ratio (OR), 1.17; 95% confidence intervals (95% CI), 1.03-1.32] and rs10090154 in region 5 (P(trend) = 0.05; per allele OR, 1.24; 95% CI, 1.01-1.51). At 18q21, associations were observed in distal colon tumors but not in proximal or rectal cancers: rs4939827 (P(trend) = 0.007; per allele OR, 0.77; 95% CI, 0.64-0.93; case-case p(diff) = 0.03) and rs12953717 (P(trend) = 0.01; per allele OR, 1.27; 95% CI, 1.06-1.52). We were unable to detect any associations at 9p24 with CRC.

conclusionsOur investigation confirms that variants across multiple risk regions of 8q24 are associated with CRC, and that associations at 18q21 differ by tumor site.

Indexed as

AgedAllelesCase-Control StudiesChi-Square DistributionChromosomes, Human, Pair 18Chromosomes, Human, Pair 8Colorectal NeoplasmsGenetic Predisposition to DiseaseGenotypeHaplotypesHumansMiddle AgedMonte Carlo MethodPolymorphism, Single NucleotideRisk FactorsSoftware

Identifiers

PMID19155440
PMCPMC2729170
OpenAlexW2122638131

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.