Evidence map›Paper›PMID 19153739›Full record

ArticlePlant cell reports2009

Analysis of genetic stability at SSR loci during somatic embryogenesis in maritime pine (Pinus pinaster).

Liliana Marum, Margarida Rocheta, João Maroco, M Margarida Oliveira, Célia Miguel

Abstract read
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In one paragraph

Article in Plant cell reports, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 79 citations in OpenAlex.

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  9. Article
  10. Genetic homogeneity revealed in micropropagatedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019
    Article
  11. Analysis of genetic stability of in vitro propagated potato microtubers using DNA markers.Physiology and molecular biology of plants : an international journal of functional plant biology · 2013
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Liliana MarumInstituto de Biologia Experimental e Tecnológica (IBET), Oeiras, Portugal.
Margarida Rocheta
João Maroco
M Margarida Oliveira
Célia Miguel
Instituto de Biologia Experimental e Tecnológica · PTISPA - Instituto Universitário · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatic embryogenesis (SE) is a propagation tool of particular interest for accelerating the deployment of new high-performance planting stock in multivarietal forestry. However, genetic conformity in in vitro propagated plants should be assessed as early as possible, especially in long-living trees such as conifers. The main objective of this work was to study such conformity based on genetic stability at simple sequence repeat (SSR) loci during somatic embryogenesis in maritime pine (Pinus pinaster Ait.). Embryogenic cell lines (ECLs) subjected to tissue proliferation during 6, 14 or 22 months, as well as emblings regenerated from several ECLs, were analyzed. Genetic variation at seven SSR loci was detected in ECLs under proliferation conditions for all time points, and in 5 out of 52 emblings recovered from somatic embryos. Three of these five emblings showed an abnormal phenotype consisting mainly of plagiotropism and loss of apical dominance. Despite the variation found in somatic embryogenesis-derived plant material, no correlation was established between genetic stability at the analyzed loci and abnormal embling phenotype, present in 64% of the emblings. The use of microsatellites in this work was efficient for monitoring mutation events during the somatic embryogenesis in P. pinaster. These molecular markers should be useful in the implementation of new breeding and deployment strategies for improved trees using SE.

Indexed as

Genomic InstabilityMicrosatellite RepeatsDNA, PlantEmbryonic DevelopmentGenetic VariationGenome, PlantPhenotypePinusSequence Analysis, DNATissue Culture TechniquesDNA, Plant

Identifiers

PMID19153739
OpenAlexW2135587144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.