Evidence map›Paper›PMID 19151385›Full record

SynthesisInvestigative ophthalmology & visual science2009

Genomewide linkage scans for ocular refraction and meta-analysis of four populations in the Myopia Family Study.

Robert Wojciechowski, Dwight Stambolian, Elise Ciner, Grace Ibay, Taura N Holmes, Joan E Bailey-Wilson

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Investigative ophthalmology & visual science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Myopia in African Americans Is Significantly Linked to Chromosome 7p15.2-14.2.Investigative ophthalmology & visual science · 2021
    Article
  2. The GGLEAM Study: Understanding Glaucoma in the Ohio Amish.International journal of environmental research and public health · 2021
    Article
  3. Review
  4. Article
  5. IMI - Myopia Genetics Report.Investigative ophthalmology & visual science · 2019
    Review
  6. Controlling myopia progression in children and adolescents.Adolescent health, medicine and therapeutics · 2015
    Review
  7. Article
  8. Article
  9. An evidence-based update on myopia and interventions to retard its progression.Journal of AAPOS : the official publication of the American Association for Pediatric Ophthalmology and Strabismus · 2011
    Article
  10. Review
  11. Epidemiology, genetics and treatments for myopia.International journal of ophthalmology · 2011
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Robert WojciechowskiInherited Disease Research Branch, National Human Genome Research Institute, Baltimore, Maryland 21231, USA. robwoj@mail.nih.gov
Dwight Stambolian
Elise Ciner
Grace Ibay
Taura N Holmes
Joan E Bailey-Wilson
National Human Genome Research Institute · USSalus University · USUniversity of Pennsylvania · US

Funding

Genetic Epidemiology of Complex TraitsZIAHG200327 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAILEY-WILSON, JOAN ELLEN · 2009 to 2022
$10.5M
GENETICS STUDIES OF MYOPIAU10EY012226 · NEI · UNIVERSITY OF PENNSYLVANIA · PI STAMBOLIAN, DWIGHT E · 1999 to 2002
$3.4M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
GENETICS STUDIES OF MYOPIAR01EY012226 · NEI · UNIVERSITY OF PENNSYLVANIA · PI STAMBOLIAN, DWIGHT EDWARD · 2003 to 2003
$720k
Intramural NIH HHS Z99 HG999999NEI NIH HHS EY12226NEI NIH HHS R01 EY012226NEI NIH HHS U10 EY012226NHGRI NIH HHS N01 HG065403
6 · The paper itself

Abstract

purposeGenomewide linkage scans were performed in Caucasian (CAUC) and Old Order Amish (OOA) families to identify genomic regions containing genes responsible for refractive error control. We also performed a meta-analysis by combining these results with our previous linkage results from Ashkenazi Jewish (ASHK) and African American (AFRAM) families.

methodsTwo hundred seventy-one CAUC and 411 OOA participants (36 and 61 families, respectively) were recruited to participate in the Myopia Family Study. Recruitment criteria were designed to enrich the sample for multiplex myopic families. Genomewide, model-free, multipoint linkage analyses were performed separately for each population by using >370 microsatellite markers. Empirical significance levels were determined via gene-dropping simulations. A meta-analysis was performed by combining linkage results from the CAUC, OOA, AFRAM, and ASHK samples, and results were compared to previously reported loci for myopia and refraction.

resultsSuggestive evidence of linkage was found at 12q24 (LOD = 4.583, P = 0.00037) and 4q21 (LOD = 2.72, P = 0.0028) in the CAUC sample and at 5qter (LOD = 3.271, P = 0.0014) in the OOA. Meta-analysis linkage results were largely driven by population-specific signals from ASHK and AFRAM families. The meta-analysis showed suggestive evidence of linkage to 4q21-22 (meta-P = 0.00214) adjacent to the previously reported MYP9 and MYP11 loci.

conclusionsThe results showed suggestive evidence of linkage of ocular refraction to 12q24 and 4q21 in CAUC and to 5qter in OOA families. The meta-analysis supports the view that several genes play a role in refractive development across populations. In MFS families, four broad genomic regions (on 1p, 4q, 7p, and 12q) most likely contain genes that influence ocular refraction.

Indexed as

Chromosome MappingGenetic LinkageAdultBlack or African AmericanBlack PeopleChromosomes, Human, Pair 12Chromosomes, Human, Pair 4FemaleGenome, HumanGenotypeHumansJewsLod ScoreMaleMyopiaQuantitative Trait Loci

Identifiers

PMID19151385
PMCPMC2885973
OpenAlexW2027349114

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.