Evidence map›Paper›PMID 19150430›Full record

ArticleMolecular cell2009

Suppression of HIV-1 Nef translation by Sam68 mutant-induced stress granules and nef mRNA sequestration.

Jorge Henao-Mejia, Ying Liu, In-Woo Park, Jizhong Zhang, Jeremy Sanford, Johnny J He

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  13. HIV-1 Nef in macrophage-mediated disease pathogenesis.International reviews of immunology · 2012
    Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Translational regulation of HIV-1 replication by HIV-1 Rev cellular cofactors Sam68, eIF5A, hRIP, and DDX3.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jorge Henao-MejiaDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Ying Liu
In-Woo Park
Jizhong Zhang
Jeremy Sanford
Johnny J He
Indiana University School of MedicineIndiana University – Purdue University Indianapolis · US

Funding

MECHANISMS OF HIV-1 ENTRY AND PATHOGENESIS IN ASTROCYTESR01NS039804 · NINDS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI HE, JOHNNY J · 2000 to 2008
$2.3M
Sam68 and HIV-1 replication control in astrocytesR01NS065785 · NINDS · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI HE, JOHNNY J · 2009 to 2013
$1.8M
Tat Interaction with LRP and Its Role in AIDS DementiaR01MH065158 · NIMH · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI HE, JOHNNY J · 2002 to 2006
$1.5M
NIMH NIH HHS R01 MH065158NIMH NIH HHS R01MH065158NINDS NIH HHS R01 NS039804NINDS NIH HHS R01NS039804NINDS NIH HHS R01 NS065785
6 · The paper itself

Abstract

HIV-1 Nef plays important roles in HIV-1 replication and pathogenesis. It is translated from completely spliced HIV-1 RNA, and its expression is inherently regulated at the levels of viral DNA transcription and RNA splicing. Here we show that Sam68 cytoplasmic mutants potently suppress Nef expression. The suppression requires Sam68 domain aa 269-321 and is correlated with its ability to induce stress granules. In addition, the suppression is specific to Nef, and direct binding to nef mRNA 3'UTR confers the suppression specificity. Furthermore, nef mRNA is targeted to and enriched in these induced stress granules. Importantly, Nef suppression occurs in the context of HIV-1 infection of CD4+ T lymphocytes with little MHC I and CD4 downregulation. Taken together, these results demonstrate that stress granule induction and nef mRNA sequestration account for this translational suppression of Nef expression and offer a strategy for development of anti-HIV therapeutics to buttress our fight against HIV/AIDS.

Indexed as

Protein Biosynthesis3' Untranslated RegionsAdaptor Proteins, Signal TransducingAnimalsBiomarkersChlorocebus aethiopsCOS CellsCytoplasmic GranulesDNA-Binding ProteinsDown-RegulationHistocompatibility Antigens Class IHIV-1HumansJurkat CellsMutant ProteinsMutation3' Untranslated RegionsAdaptor Proteins, Signal TransducingBiomarkersDNA-Binding ProteinsHistocompatibility Antigens Class IKHDRBS1 protein, humanMutant Proteinsnef Gene Products, Human Immunodeficiency VirusRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID19150430
PMCPMC2644331
OpenAlexW2122380318

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.