Evidence map›Paper›PMID 19150398›Full record

ReviewGenomics2009

Quantitative trait loci, genes, and polymorphisms that regulate bone mineral density in mouse.

Qing Xiong, Yan Jiao, Karen A Hasty, S Terry Canale, John M Stuart, Wesley G Beamer, Hong-Wen Deng, David Baylink, Weikuan Gu

Open access · greenAbstract readReview
In one paragraph

Review in Genomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Male Lrp5A214V mice maintain high bone mass during dietary calcium restriction by altering the vitamin D endocrine system.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2024
    Article
  3. Article
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  6. Review
  7. Review
  8. In silico mapping of quantitative trait loci (QTL) regulating the milk ionome in mice identifies a milk iron locus on chromosome 1.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Congenic mice provide in vivo evidence for a genetic locus that modulates intrinsic transforming growth factor β1-mediated signaling and bone acquisition.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2012
    Article
  16. Article
  17. Identification of quantitative trait loci influencing skeletal architecture in mice: emergence of Cdh11 as a primary candidate gene regulating femoral morphology.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2011
    Article
  18. Article
  19. BMD regulation on mouse distal chromosome 1, candidate genes, and response to ovariectomy or dietary fat.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Qing XiongDepartment of Orthopaedic Surgery - Campbell Clinic and Pathology, University of Tennessee Health Science Center, Memphis, TN 38163, USA. qxiong1@utmem.edu
Yan Jiao
Karen A Hasty
S Terry Canale
John M Stuart
Wesley G Beamer
Hong-Wen Deng
David Baylink
Weikuan Gu
University of Tennessee Health Science Center · USJackson Laboratory · USLoma Linda University · USSouthwest University · CNUniversity of Missouri–Kansas City · US

Funding

GENETIC AND DYNAMIC ANALYSES OF PEAK BONE DENSITY IN MICER01AR043618 · NIAMS · JACKSON LABORATORY · PI DONAHUE, LEAH RAE B · 1996 to 2009
$4.4M
MUTATION SCREENING OF SKELETAL DISEASE MOUSE MODELSR01AR051190 · NIAMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI GU, WEIKUAN · 2004 to 2007
$1.1M
GENETIC AND CELLULAR REGULATION OF PEAK BONE DENSITYR55AR043618 · NIAMS · JACKSON LABORATORY · PI BEAMER, WESLEY G · 1995 to 1995
–
NIAMS NIH HHS AR 43618NIAMS NIH HHS AR51190NIAMS NIH HHS R01 AR043618NIAMS NIH HHS R01 AR051190
6 · The paper itself

Abstract

This is an in silico analysis of data available from genome-wide scans. Through analysis of QTL, genes and polymorphisms that regulate BMD, we identified 82 BMD QTL, 191 BMD-associated (BMDA) genes, and 83 genes containing known BMD-associated polymorphisms (BMDAP). The catalogue of all BMDA/BMDAP genes and relevant literatures are provided. In total, there are substantially more BMDA/BMDAP genes in regions of the genome where QTL have been identified than in non-QTL regions. Among 191 BMDA genes and 83 BMDAP genes, 133 and 58 are localized in QTL regions, respectively. The difference was still noticeable for the chromosome distribution of these genes between QTL and non-QTL regions. These results have allowed us to generate an integrative profile of QTL, genes, polymorphisms that determine BMD. These data could facilitate more rapid and comprehensive identification of causal genes underlying the determination of BMD in mouse and provide new insights into how BMD is regulated in humans.

Indexed as

Quantitative Trait LociAnimalsBone DensityGene OrderMicePolymorphism, Genetic

Identifiers

PMID19150398
PMCPMC2901167
OpenAlexW2043227785

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.