Evidence map›Paper›PMID 19149898›Full record

ArticleMolecular cancer2009

The chromatin remodelling factor BRG1 is a novel binding partner of the tumor suppressor p16INK4a.

Therese M Becker, Sebastian Haferkamp, Menno K Dijkstra, Lyndee L Scurr, Monika Frausto, Eve Diefenbach, Richard A Scolyer, David N Reisman, Graham J Mann, Richard F Kefford and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
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  7. Brahma compensates the role of brahma-related gene 1 in liver regeneration ofInternational journal of clinical and experimental pathology · 2017
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  15. Functional epigenetics approach identifies BRM/SMARCA2 as a critical synthetic lethal target in BRG1-deficient cancers.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. SWI/SNF chromatin remodeling enzymes in melanocyte differentiation and melanoma.Critical reviews in eukaryotic gene expression · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Therese M BeckerWestmead Institute for Cancer Research, University of Sydney, Westmead Millennium Institute and Westmead Hospital, Australia. therese_becker@wmi.usyd.edu.au
Sebastian Haferkamp
Menno K Dijkstra
Lyndee L Scurr
Monika Frausto
Eve Diefenbach
Richard A Scolyer
David N Reisman
Graham J Mann
Richard F Kefford
Helen Rizos
The University of Sydney · AUWestmead Institute · AUUniversity of Michigan · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCDKN2A/p16INK4a is frequently altered in human cancers and it is the most important melanoma susceptibility gene identified to date. p16INK4a inhibits pRb phosphorylation and induces cell cycle arrest, which is considered its main tumour suppressor function. Nevertheless, additional activities may contribute to the tumour suppressor role of p16INK4a and could help explain its specific association with melanoma predisposition. To identify such functions we conducted a yeast-two-hybrid screen for novel p16INK4a binding partners.

resultsWe now report that p16INK4a interacts with the chromatin remodelling factor BRG1. We investigated the cooperative roles of p16INK4a and BRG1 using a panel of cell lines and a melanoma cell model with inducible p16INK4a expression and BRG1 silencing. We found evidence that BRG1 is not required for p16INK4a-induced cell cycle inhibition and propose that the p16INK4a-BRG1 complex regulates BRG1 chromatin remodelling activity. Importantly, we found frequent loss of BRG1 expression in primary and metastatic melanomas, implicating this novel p16INK4a binding partner as an important tumour suppressor in melanoma.

conclusionThis data adds to the increasing evidence implicating the SWI/SNF chromatin remodelling complex in tumour development and the association of p16INK4a with chromatin remodelling highlights potentially new functions that may be important in melanoma predisposition and chemoresistance.

Indexed as

Blotting, WesternCell CycleCell Line, TumorCellular SenescenceCyclin-Dependent Kinase Inhibitor p16DNA HelicasesHumansImmunohistochemistryImmunoprecipitationMelanomaNuclear ProteinsProtein BindingSignal TransductionTranscription FactorsTwo-Hybrid System TechniquesCyclin-Dependent Kinase Inhibitor p16DNA HelicasesNuclear ProteinsSMARCA4 protein, humanTranscription Factors

Identifiers

PMID19149898
PMCPMC2644676
OpenAlexW2095621048

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.