Evidence map›Paper›PMID 19148268›Full record

ArticlePLoS pathogens2009

miR-198 inhibits HIV-1 gene expression and replication in monocytes and its mechanism of action appears to involve repression of cyclin T1.

Tzu-Ling Sung, Andrew P Rice

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 163 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
163citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

163 citing papers in PubMed, 1 synthesis or guideline pooled it, 226 citations in OpenAlex.

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103 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tzu-Ling SungDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Andrew P Rice
Baylor College of Medicine · US

Funding

Mechanisms of HIV-1 latency in CD4+ T lymphocytesR01AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1995 to 2007
$2.5M
REGULATION OF MRNA FOR TAK SUBUNITS IN T LYMPHOCYTESR01AI045374 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1999 to 2008
$1.9M
Mechanism of HIV-1 Tat FunctionR56AI035381 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2009 to 2009
$384k
Regulation of Tak/P-TEFbR21AI045374 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 2003 to 2003
$263k
NIAID NIH HHS AI35381NIAID NIH HHS AI45374NIAID NIH HHS R01 AI035381NIAID NIH HHS R01 AI045374NIAID NIH HHS R21 AI045374NIAID NIH HHS R56 AI035381PHS HHS P30A1036211
6 · The paper itself

Abstract

Cyclin T1 is a regulatory subunit of a general RNA polymerase II elongation factor known as P-TEFb. Cyclin T1 is also required for Tat transactivation of HIV-1 LTR-directed gene expression. Translation of Cyclin T1 mRNA has been shown to be repressed in human monocytes, and this repression is relieved when cells differentiate to macrophages. We identified miR-198 as a microRNA (miRNA) that is strongly down-regulated when monocytes are induced to differentiate. Ectopic expression of miR-198 in tissue culture cells reduced Cyclin T1 protein expression, and plasmid reporter assays verified miR-198 target sequences in the 3' untranslated region (3'UTR) of Cyclin T1 mRNA. Cyclin T1 protein levels increased when an inhibitor of miR-198 was transfected into primary monocytes, and overexpression of miR-198 in primary monocytes repressed the normal up-regulation of Cyclin T1 during differentiation. Expression of an HIV-1 proviral plasmid and HIV-1 replication were repressed in a monocytic cell line upon overexpression of miR-198. Our data indicate that miR-198 functions to restrict HIV-1 replication in monocytes, and its mechanism of action appears to involve repression of Cyclin T1 expression.

Indexed as

3' Untranslated RegionsCell DifferentiationCell LineCyclinsCyclin TDown-RegulationHIV-1HIV InfectionsHIV Long Terminal RepeatHumansMacrophagesMicroRNAsMonocytesRNA, MessengerVirus Replication3' Untranslated RegionsCCNT1 protein, humanCyclinsCyclin TMicroRNAsMIRN198 microRNA, humanRNA, Messenger

Identifiers

PMID19148268
PMCPMC2607557
OpenAlexW1991749307

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.