Evidence map›Paper›PMID 19140237›Full record

ArticleWorld journal of gastroenterology2009

Genomic-wide analysis of lymphatic metastasis-associated genes in human hepatocellular carcinoma.

Chun Feng Lee, Zhi Qiang Ling, Ting Zhao, Shih Hua Fang, Weng Cheng Chang, San Chih Lee, Kuan Rong Lee

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  6. PTP61F Mediates Cell Competition and Mitigates Tumorigenesis.International journal of molecular sciences · 2021
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  11. Eph receptors: the bridge linking host and virus.Cellular and molecular life sciences : CMLS · 2020
    Review
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  17. PTPN2: a tumor suppressor you want deleted?Immunology and cell biology · 2017
    Article
  18. Role of MAPK7 in cell proliferation and metastasis in ovarian cancer.International journal of clinical and experimental pathology · 2015
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Chun Feng LeeInstitute of Molecular Medicine, National Tsing Hua University, Hsinchu, Taiwan, China.
Zhi Qiang Ling
Ting Zhao
Shih Hua Fang
Weng Cheng Chang
San Chih Lee
Kuan Rong Lee
National Tsing Hua University · TWKanazawa University · JPNational Taiwan Sport University · TWZhejiang Academy of Medical Sciences · CNZhejiang Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo identify the genes related to lymph node metastasis in human hepatocellular carcinoma (HCC), 32 HCC patients with or without lymph node metastasis were investigated by high-throughput microarray comprising 886 genes.

methodsThe samples of cancerous and non-cancerous paired tissue were taken from 32 patients with HCC who underwent hepatectomy with lymph node dissection. Total RNA was extracted from the cells obtained by means of laser microdissection (LCM) and was amplified by the T7-based amplification system. Then, the amplified samples were applied in the cDNA microarray comprising of 886 genes.

resultsThe results demonstrated that 25 up-regulated genes such as cell membrane receptor, intracellular signaling and cell adhesion related genes, and 48 down-regulated genes such as intracellular signaling and cell cycle regulator-related genes, were correlated with lymph node metastasis in HCC. Amongst them were included some interesting genes, such as MET, EPHA2, CCND1, MMP2, MMP13, CASP3, CDH1, and PTPN2. Expression of 16 genes (MET, CCND1, CCND2, VEGF, KRT18, RFC4, BIRC5, CDC6, MMP2, BCL2A1, CDH1, VIM, PDGFRA, PTPN2, SLC25A5 and DSP) were further confirmed by real-time quantitative reverse transcriptional polymerase chain reaction (RT-PCR).

conclusionTumor metastasis is an important biological characteristic, which involves multiple genetic changes and cumulation. This genome-wide information contributes to an improved understanding of molecular alterations during lymph node metastasis in HCC. It may help clinicians to predict metastasis of lymph nodes and assist researchers in identifying novel therapeutic targets for metastatic HCC patients.

Indexed as

Carcinoma, HepatocellularGenomeLiver NeoplasmsAdultAgedFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansLymphatic MetastasisLymph NodesMaleMicrodissectionMiddle AgedMolecular Sequence DataNeoplasm Invasiveness

Identifiers

PMID19140237
PMCPMC2653334
OpenAlexW1971291256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.