Evidence map›Paper›PMID 19139913›Full record

ArticleChromosoma2009

Disruption of FEM1C-W gene in zebra finch: evolutionary insights on avian ZW genes.

Yuichiro Itoh, Kathy Kampf, Arthur P Arnold

Open access · hybridAbstract read
PubMed Publisher
In one paragraph

Article in Chromosoma, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. International journal of molecular sciences · 2024
    Article
  2. Article
  3. Avian sex, sex chromosomes, and dosage compensation in the age of genomics.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2014
    Review
  4. Article
  5. A W-linked palindrome and gene conversion in New World sparrows and blackbirds.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yuichiro ItohDepartment of Physiological Science, University of California, UCLA 621 Charles E. Young Drive South, Room 4117, Los Angeles, CA 90095-1606, USA. yitoh@physci.ucla.edu
Kathy Kampf
Arthur P Arnold
University of California, Los Angeles · USUCLA Health · US

Funding

NEURAL &HORMONAL BASES OF VOCALIZATIONR01DC000217 · NIDCD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARNOLD, ARTHUR P · 1989 to 2008
$2.4M
NIDCD NIH HHS DC000217NIDCD NIH HHS R01 DC000217
6 · The paper itself

Abstract

Sex chromosome genes control sex determination and differentiation, but the mechanisms of sex determination in birds are unknown. In this study, we analyzed the gene FEM1C which is highly conserved from Caenorhabditis elegans to higher vertebrates and interacts with the sex determining pathway in C. elegans. We found that FEM1C is located on the Z and W chromosome of zebra finches and probably other Passerine birds, but shows only Z linkage in other avian orders. In the zebra finch, FEM1C-W is degraded because of a point mutation and possibly because of loss of the first exon containing the start methionine. Thus, FEM1C-W appears to have degenerated or been lost from most bird species. FEM1C-Z is expressed in a cytoplasmic location in zebra finch fibroblast cells, as in C. elegans. FEM1C represents an interesting example of evolutionary degradation of a W chromosome gene.

Indexed as

Evolution, MolecularAmino Acid SequenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell Cycle ProteinsChickensFemaleFinchesHumansMaleMiceMolecular Sequence DataPhylogenySequence AlignmentSequence Analysis, DNACaenorhabditis elegans ProteinsCell Cycle ProteinsFEM-1 protein, C elegans

Identifiers

PMID19139913
OpenAlexW1978344891

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.