ArticleGenetics2009
Single nucleotide polymorphisms in the allene oxide synthase 2 gene are associated with field resistance to late blight in populations of tetraploid potato cultivars.
Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.
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Who cites it
33 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.
- Unraveling the genetic basis of quantitative resistance to diseases in tomato: a meta-QTL analysis and mining of transcript profiles.Plant cell reports · 2024Pooled it
- A physical map of traits of agronomic importance based on potato and tomato genome sequences.Frontiers in genetics · 2023Review
- The power of genomic estimated breeding values for selection when using a finite population size in genetic improvement of tetraploid potato.G3 (Bethesda, Md.) · 2022Article
- Protein Elicitor EsxA Induces Resistance to Seedling Blight and PR Genes Differential Transcription in Rice.Rice (New York, N.Y.) · 2021Article
- Genome-wide association study identifies various loci underlying agronomic and morphological traits in diversified potato panel.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020Article
- Novel organ-specific genetic factors for quantitative resistance to late blight in potato.PloS one · 2019Article
- Linkage Disequilibrium and Evaluation of Genome-Wide Association Mapping Models in Tetraploid Potato.G3 (Bethesda, Md.) · 2018Article
- Assortment of Flowering Time and Immunity Alleles in Natural Arabidopsis thaliana Populations Suggests Immunity and Vegetative Lifespan Strategies Coevolve.Genome biology and evolution · 2018Article
- Genomic Selection for Late Blight and Common Scab Resistance in Tetraploid Potato (G3 (Bethesda, Md.) · 2018Article
- Identification and functional characterisation of an allene oxide synthase from grapevine (Vitis vinifera L. Sauvignon blanc).Molecular biology reports · 2018Article
- Association Mapping Analysis for Fruit Quality Traits inFrontiers in plant science · 2018Article
- Prospects and Potential Uses of Genomic Prediction of Key Performance Traits in Tetraploid Potato.Frontiers in plant science · 2018Article
- Article
- Identification of Novel Associations of Candidate Genes with Resistance to Late Blight inFrontiers in plant science · 2017Article
- Identification and reproducibility of diagnostic DNA markers for tuber starch and yield optimization in a novel association mapping population of potato (Solanum tuberosum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- Article
- Differential expression of jasmonate biosynthesis genes in cacao genotypes contrasting for resistance against Moniliophthora perniciosa.Plant cell reports · 2015Article
- Cytoplasmic genome types of European potatoes and their effects on complex agronomic traits.BMC plant biology · 2015Article
- Selection and validation of potato candidate genes for maturity corrected resistance to Phytophthora infestans based on differential expression combined with SNP association and linkage mapping.Frontiers in genetics · 2015Article
- Starch phosphorylation in potato tubers is influenced by allelic variation in the genes encoding glucan water dikinase, starch branching enzymes I and II, and starch synthase III.Frontiers in plant science · 2015Article
Corrections and comments
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Authors and funding
14 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The oomycete Phytophthora infestans causes late blight, the most relevant disease of potato (Solanum tuberosum) worldwide. Field resistance to late blight is a complex trait. When potatoes are cultivated under long day conditions in temperate climates, this resistance is correlated with late plant maturity, an undesirable characteristic. Identification of natural gene variation underlying late blight resistance not compromised by late maturity will facilitate the selection of resistant cultivars and give new insight in the mechanisms controlling quantitative pathogen resistance. We tested 24 candidate loci for association with field resistance to late blight and plant maturity in a population of 184 tetraploid potato individuals. The individuals were genotyped for 230 single nucleotide polymorphisms (SNPs) and 166 microsatellite alleles. For association analysis we used a mixed model, taking into account population structure, kinship, allele substitution and interaction effects of the marker alleles at a locus with four allele doses. Nine SNPs were associated with maturity corrected resistance (P < 0.001), which collectively explained 50% of the genetic variance of this trait. A major association was found at the StAOS2 locus encoding allene oxide synthase 2, a key enzyme in the biosynthesis of jasmonates, plant hormones that function in defense signaling. This finding supports StAOS2 as being one of the factors controlling natural variation of pathogen resistance.
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