Evidence map›Paper›PMID 19139098›Full record

ArticleThe Journal of biological chemistry2009

Role of the oxyferrous heme intermediate and distal side adduct radical in the catalase activity of Mycobacterium tuberculosis KatG revealed by the W107F mutant.

Xiangbo Zhao, Shengwei Yu, Kalina Ranguelova, Javier Suarez, Leonid Metlitsky, Johannes P M Schelvis, Richard S Magliozzo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Catalase-peroxidase (KatG): a potential frontier in tuberculosis drug development.Critical reviews in biochemistry and molecular biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Xiangbo ZhaoDepartment of Chemistry, Brooklyn College, Brooklyn, New York 11210, USA.
Shengwei Yu
Kalina Ranguelova
Javier Suarez
Leonid Metlitsky
Johannes P M Schelvis
Richard S Magliozzo
Brooklyn College · USCity University of New York · USNew York University · US

Funding

Catalysis of isoniazid action by M tuberculosis KatGR01AI060014 · NIAID · BROOKLYN COLLEGE · PI MAGLIOZZO, RICHARD S · 2005 to 2009
$1.7M
CATALASE-PEROXIDASE CATALYSIS IN ANTIBIOTIC ACTIVATIONR01AI043582 · NIAID · YESHIVA UNIVERSITY · PI MAGLIOZZO, RICHARD S · 1998 to 2002
$603k
Catalysis of Isoniazid action by M. tuberculosis catalase-peroxidaseR56AI060014 · NIAID · BROOKLYN COLLEGE · PI MAGLIOZZO, RICHARD S · 2010 to 2010
$509k
NIAID NIH HHS AI-060014NIAID NIH HHS AI-43582
6 · The paper itself

Abstract

Catalase-peroxidase (KatG) is essential in Mycobacterium tuberculosis for oxidative stress management and activation of the antitubercular pro-drug isoniazid. The role of a unique distal side adduct found in KatG enzymes, involving linked side chains of residues Met255, Tyr229, and Trp107 (MYW), in the unusual catalase activity of KatG is addressed here and in our companion paper (Suarez, J., Ranguelova, K., Jarzecki, A. A., Manzerova, J., Krymov, V., Zhao, X., Yu, S., Metlitsky, L., Gerfen, G. J., and Magliozzo, R. S. (2009) J. Biol. Chem. 284, in press). The KatG[W107F] mutant exhibited severely reduced catalase activity yet normal peroxidase activity, and as isolated contains more abundant 6-coordinate heme in high spin and low spin forms compared with the wild-type enzyme. Most interestingly, oxyferrous heme is also found in the purified enzyme. Oxyferrous KatG[W107F] was prepared by photolysis in air of the carbonyl enzyme or was generated using hydrogen peroxide decayed with a t1/2 of 2 days compared with 6 min for wild-type protein. The stability of oxyenyzme was modestly enhanced in KatG[Y229F] but was not affected in KatG[M255A]. Optical stopped-flow experiments showed rapid formation of Compound I in KatG[W107F] and facile formation of oxyferrous heme in the presence of micromolar hydrogen peroxide. An analysis of the relationships between catalase activity, stability of oxyferrous enzyme, and a proposed MYW adduct radical is presented. The loss of catalase function is assigned to the loss of the MYW adduct radical and structural changes that lead to greatly enhanced stability of oxyenzyme, an intermediate of the catalase cycle of native enzyme.

Indexed as

Amino Acid SubstitutionMutation, MissenseBacterial ProteinsCatalaseEnzyme StabilityHemeHydrogen PeroxideIsoniazidModels, ChemicalMycobacterium tuberculosisOxidation-ReductionOxidative StressProdrugsProtein Structure, TertiaryBacterial ProteinsCatalaseHemeHydrogen PeroxideIsoniazidkatG protein, Mycobacterium tuberculosisProdrugs

Identifiers

PMID19139098
PMCPMC2652290
OpenAlexW2044264629

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.