Evidence map›Paper›PMID 19138656›Full record

ArticleArchives of biochemistry and biophysics2009

Redox responses in yeast to acetate as the carbon source.

Karyl I Minard, L McAlister-Henn

Abstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Environmental Regulation and Gene-by-Environment Interaction InfluencebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Karyl I MinardDepartment of Biochemistry, University of Texas Health Science Center, San Antonio, 78229-3900, USA.
L McAlister-Henn

Funding

MOLECULAR GENETICS OF ISOCITRATE DEHYDROGENASESR01GM051265 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MCALISTER-HENN, LEE · 1994 to 2011
$3.3M
CYTOSOLIC SOURCES OF NADPH AS ANTIOXIDANTSR01AG017477 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MCALISTER-HENN, LEE · 2000 to 2009
$2.1M
NIA NIH HHS R01 AG017477NIGMS NIH HHS R01 GM051265
6 · The paper itself

Abstract

Following a shift to medium with acetate as the carbon source, a parental yeast strain exhibited a transient moderate 20% reduction in total cellular [NAD(+)+NADH] but showed a approximately 10-fold increase in the ratio of [NAD(+)]:[NADH] after 36h. A mutant strain (idhDelta) lacking the tricarboxylic acid cycle enzyme isocitrate dehydrogenase had 50% higher cellular levels of [NAD(+)+NADH] relative to the parental strain but exhibited similar changes in cofactor concentrations following a shift to acetate medium, despite an inability to grow on that carbon source; essentially all of the cofactor was in the oxidized form within 36h. The salvage pathway for NAD(H) biosynthesis was found to be particularly important for viability during early transition of the parental strain to stationary phase in acetate medium. However, oxygen consumption was not affected, suggesting that the NAD(H) produced during this time may support other cellular functions. The idhDelta mutant exhibited increased flux through the salvage pathway in acetate medium but was dependent on the de novo pathway for viability. Long-term chronological lifespans of the parental and idhDelta strains were similar, but viability of the mutant strain was dependent on both pathways for NAD(H) biosynthesis.

Indexed as

Acetic AcidCarbonCitric Acid CycleCulture MediaGenes, FungalGlucoseIsocitrate DehydrogenaseMutationNADNicotinamidaseNicotinate-Nucleotide Diphosphorylase (Carboxylating)Oxidation-ReductionOxygen ConsumptionPentosyltransferasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAcetic AcidCarbonCulture MediaGlucoseIsocitrate DehydrogenaseNADNicotinamidaseNicotinate-Nucleotide Diphosphorylase (Carboxylating)PentosyltransferasesPNC1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID19138656
PMCPMC2794691

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.