Evidence map›Paper›PMID 19137362›Full record

ArticleWorld journal of surgery2009

Microarray analysis of somatostatin receptor 5-regulated gene expression profiles in murine pancreas.

Sanjeet G Patel, Guisheng Zhou, Shi-He Liu, Min Li, Jae-Wook Jeong, Francesco J DeMayo, Marie-Claude Gingras, Richard A Gibbs, William E Fisher, F Charles Brunicardi

Abstract read
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In one paragraph

Article in World journal of surgery, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Regulatory Mechanisms of Somatostatin Expression.International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Sanjeet G PatelThe Michael E. DeBakey Department of Surgery, Baylor College of Medicine, 1709 Dryden Street, Suite 1500, Houston, TX 77030, USA.
Guisheng Zhou
Shi-He Liu
Min Li
Jae-Wook Jeong
Francesco J DeMayo
Marie-Claude Gingras
Richard A Gibbs
William E Fisher
F Charles Brunicardi
Baylor College of Medicine · US

Funding

Intraislet Communication in Surgically-Altered PancreasR01DK046441 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BRUNICARDI, FRANCIS CHARLES · 1998 to 2007
$1.9M
Molecular Surgeon Symposium on Genetics and Genomics of Pancreatic CancerR13CA132572 · NCI · BAYLOR COLLEGE OF MEDICINE · PI CHEN, CHANGYI · 2008 to 2008
$5k
NCI NIH HHS R13 CA132572NIDDK NIH HHS R01-DK46441
6 · The paper itself

Abstract

backgroundWe previously demonstrated that somatostatin receptor type 5 (SSTR5) gene ablation results in alterations in insulin secretion and glucose metabolism, accompanied by morphologic alterations in the islets of Langerhans. The underlying mechanism(s) by which SSTR5 exerts its cellular functions remain(s) unknown. We hypothesized that SSTR5 mediates the inhibitory effect of somatostatin (SST) on insulin secretion and islet proliferation by regulating a specific set of pancreatic genes.

methodsTo identify SSTR5-regulated pancreatic genes, gene expression microarray analysis was performed on the whole pancreas of 1- and 3-month-old wild-type (WT) and SSTR5 knockout (SSTR5-/-) male mice. Real-time RT-PCR and immunofluorescence were performed to validate selected differentially expressed genes.

resultsA set of 143 probes were identified to be differentially expressed in the pancreas of 1-month-old SSTR5-/- mice, 72 of which were downregulated and 71 upregulated. At 3 months of age, SSTR5 gene ablation resulted in downregulation of a set of 30 probes and upregulation of a set of 37 probes. Among these differentially expressed genes, there were 15 and 5 genes that were upregulated and downregulated, respectively, in mice at both 1 and 3 months of age. Three genes, PAP/INGAP, ANG, and TDE1, were selected to be validated by real-time RT-PCR and immunofluorescence.

conclusionsA specific set of genes linked to a wide range of cellular functions such as islet proliferation, apoptosis, angiogenesis, and tumorigenesis were either upregulated or downregulated in SSTR5-deficient male mice compared with their expression in wild-type mice. Therefore, these genes are potential SSTR5-regulated genes during normal pancreatic development and functional maintenance.

Indexed as

Gene Expression ProfilingOligonucleotide Array Sequence AnalysisAnimalsApoptosisCell ProliferationDown-RegulationFluorescent Antibody TechniqueIslets of LangerhansMaleMembrane GlycoproteinsMiceMice, KnockoutNeoplasm ProteinsNeovascularization, PathologicPancreasPancreatitis-Associated ProteinsangiogeninMembrane GlycoproteinsNeoplasm ProteinsPancreatitis-Associated ProteinsProteinsReceptors, Cell SurfaceReceptors, SomatostatinREG3A protein, humanReg3b protein, mouseRibonuclease, PancreaticSerinc3 protein, mousesomatostatin receptor 5

Identifiers

PMID19137362
OpenAlexW2022533718

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.