Evidence map›Paper›PMID 19137107›Full record

ArticleJournal of biomolecular techniques : JBT2008

Application of atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry for rapid identification of Neisseria species.

Seshu K Gudlavalleti, Appavu K Sundaram, Jane Razumovski, Vladimir Doroshenko

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Seshu K GudlavalletiScience and Engineering Services, Inc, Columbia, MD 21046, USA. seshu@apmaldi.com
Appavu K Sundaram
Jane Razumovski
Vladimir Doroshenko
Science and Engineering Services (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Atmospheric pressure matrix-assisted laser desorption/ionization mass spectrometry (AP-MALDI MS) was applied to develop a proteomics-based method to detect and identify Neisseria species. Heat-inactivated clinical isolate cell suspensions of Neisseria gonorrhoeae and strains belonging to five serogroups (A, B, C, W135, and Y) of Neisseria meningitidis were subjected to on-probe protein/peptide extraction and tryptic digestion followed by AP-MALDI tandem MS (MS/MS)-based proteomic analysis. Amino acid sequences derived from three protonated peptides with m/z values of 1743.8, 1894.8, and 1946.8 were identified by AP-MALDI MS/MS and MASCOT proteome database search analysis as belonging to neisserial acyl carrier protein, neisserial-conserved hypothetical protein, and neisserial putative DNA binding protein, respectively. These three peptide masses can thus be potential biomarkers for neisserial species identification by AP-MALDI MS.

Indexed as

Amino Acid SequenceAtmospheric PressureBacterial ProteinsBiotechnologyHumansMolecular Sequence DataNeisseriaNeisseria gonorrhoeaeNeisseria meningitidisPeptide FragmentsProteomeProteomicsSerotypingSpecies SpecificitySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass SpectrometryBacterial ProteinsPeptide FragmentsProteomeTrypsin

Identifiers

PMID19137107
PMCPMC2563927
OpenAlexW1270190191

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.