Evidence map›Paper›PMID 19137104›Full record

ArticleJournal of biomolecular techniques : JBT2008

Selective glutaraldehyde-mediated coupling of proteins to the 3'-adenine terminus of polymerase chain reaction products.

John G Bruno, Randy Crowell

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

John G BrunoOperational Technologies Corporation, San Antonio, TX 78229, USA. john.bruno@otcorp.com
Randy Crowell
Operational Technologies Corporation (United States) · US

Funding

Nuclease-Resistant Aptamers for Anthrax OpsonizationR43AI058423 · NIAID · OPERATIONAL TECHNOLOGIES CORPORATION · PI BRUNO, JOHN G · 2004 to 2004
$100k
NIAID NIH HHS 1R43AI058423-01NIAID NIH HHS R43 AI058423
6 · The paper itself

Abstract

Attachment of proteins to the 3' end of DNA increases stability of the DNA in serum and retards clearance of DNA by major organs, thereby enhancing in vivo half-life and therapeutic potential of DNA. Unfortunately, the length of DNA molecules that can be produced with 3 ' modifications by solid-phase synthesis for protein attachment is limited to 45-60 nucleotides due to uncertainties about sequence fidelity for longer oligonucleotides. Here we describe selective covalent coupling of proteins or other molecules to the 3'-adenine overhang of unlabeled and fluorophore-labeled double-stranded polymerase chain reaction products putatively at the N6 position of adenine using 2.5% glutaraldehyde at pH 6.0 and 4 degrees C for at least 16 h. Gel mobility shift analyses and fluorescence analyses of the shifted bands supported conjugate formation between double-stranded polymerase chain reaction products and beta2-microglobulin. In addition, blunt-ended DNA ladder fragments treated with glutaraldehyde at 4 degrees C showed no evidence of DNA-DNA or DNA-protein conjugate formation. With the present cold glutaraldehyde technique, longer DNA-3'-protein conjugates might be easily mass-produced. The protein portion of a DNA-3'-protein conjugate could possess functionality as well, such as receptor binding for cell entry, cytotoxicity, or opsonization.

Indexed as

AdenineAptamers, NucleotideBase Sequencebeta 2-MicroglobulinBiotechnologyCross-Linking ReagentsDNADNA PrimersElectrophoretic Mobility Shift AssayGlutaralPeptide Nucleic AcidsPolymerase Chain ReactionProteinsSpectrometry, FluorescenceAdenineAptamers, Nucleotidebeta 2-MicroglobulinCross-Linking ReagentsDNADNA PrimersGlutaralPeptide Nucleic AcidsProteins

Identifiers

PMID19137104
PMCPMC2563924
OpenAlexW42833255

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.