Evidence map›Paper›PMID 19136597›Full record

ArticleJournal of bacteriology2009

African 1, an epidemiologically important clonal complex of Mycobacterium bovis dominant in Mali, Nigeria, Cameroon, and Chad.

Borna Müller, Markus Hilty, Stefan Berg, M Carmen Garcia-Pelayo, James Dale, M Laura Boschiroli, Simeon Cadmus, Bongo Naré Richard Ngandolo, Sylvain Godreuil, Colette Diguimbaye-Djaibé and 24 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed.

  1. Article
  2. Insight into the genetic diversity ofMicrobiology spectrum · 2026
    Article
  3. First report of whole genome sequence of a Mycobacterium bovis (3/86Rv) strain isolated from a cow in India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  4. Article
  5. Enhanced analysis of the genomic diversity ofFrontiers in microbiology · 2025
    Article
  6. Zoonotic transmission of theFrontiers in veterinary science · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. InsideFrontiers in microbiology · 2024
    Article
  11. Molecular Characterisation ofCurrent issues in molecular biology · 2023
    Article
  12. Review
  13. Features ofMicroorganisms · 2023
    Article
  14. Article
  15. Unraveling the epidemiology ofFrontiers in veterinary science · 2023
    Article
  16. Spoligotype analysis ofZoonoses and public health · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Borna MüllerSwiss Tropical Institute, Socinstrasse 57, 4002 Basel, Switzerland.
Markus Hilty
Stefan Berg
M Carmen Garcia-Pelayo
James Dale
M Laura Boschiroli
Simeon Cadmus
Bongo Naré Richard Ngandolo
Sylvain Godreuil
Colette Diguimbaye-Djaibé
Rudovick Kazwala
Bassirou Bonfoh
Betty M Njanpop-Lafourcade
Naima Sahraoui
Djamel Guetarni
Abraham Aseffa
Meseret H Mekonnen
Voahangy Rasolofo Razanamparany
Herimanana Ramarokoto
Berit Djønne
James Oloya
Adelina Machado
Custodia Mucavele
Eystein Skjerve
Francoise Portaels
Leen Rigouts
Anita Michel
Annélle Müller
Gunilla Källenius
Paul D van Helden
R Glyn Hewinson
Jakob Zinsstag
Stephen V Gordon
Noel H Smith

Funding

Wellcome Trust
6 · The paper itself

Abstract

We have identified a clonal complex of Mycobacterium bovis present at high frequency in cattle in population samples from several sub-Saharan west-central African countries. This closely related group of bacteria is defined by a specific chromosomal deletion (RDAf1) and can be identified by the absence of spacer 30 in the standard spoligotype typing scheme. We have named this group of strains the African 1 (Af1) clonal complex and have defined the spoligotype signature of this clonal complex as being the same as the M. bovis BCG vaccine strain but with the deletion of spacer 30. Strains of the Af1 clonal complex were found at high frequency in population samples of M. bovis from cattle in Mali, Cameroon, Nigeria, and Chad, and using a combination of variable-number tandem repeat typing and spoligotyping, we show that the population of M. bovis in each of these countries is distinct, suggesting that the recent mixing of strains between countries is not common in this area of Africa. Strains with the Af1-specific deletion (RDAf1) were not identified in M. bovis isolates from Algeria, Burundi, Ethiopia, Madagascar, Mozambique, South Africa, Tanzania, and Uganda. Furthermore, the spoligotype signature of the Af1 clonal complex has not been identified in population samples of bovine tuberculosis from Europe, Iran, and South America. These observations suggest that the Af1 clonal complex is geographically localized, albeit to several African countries, and we suggest that the dominance of the clonal complex in this region is the result of an original introduction into cows naïve to bovine tuberculosis.

Indexed as

AfricaAnimalsBacterial Typing TechniquesCattleChromosome DeletionMolecular Sequence DataMycobacterium bovisTuberculosis, Bovine

Identifiers

PMID19136597
PMCPMC2648362

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.