Evidence map›Paper›PMID 19135889›Full record

ArticleCell2009

SIRT6 links histone H3 lysine 9 deacetylation to NF-kappaB-dependent gene expression and organismal life span.

Tiara L A Kawahara, Eriko Michishita, Adam S Adler, Mara Damian, Elisabeth Berber, Meihong Lin, Ron A McCord, Kristine C L Ongaigui, Lisa D Boxer, Howard Y Chang and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 607 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
607citing papers in PubMed, 1 pooled it
30.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

607 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,062 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Aging and cancer: current understandings and future perspectives.Signal transduction and targeted therapy · 2026
    Review
  10. The Sirtuin Network: Linking NADDiabetes/metabolism research and reviews · 2026
    Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

547 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Tiara L A KawaharaProgram in Epithelial Biology, Division of Endocrinology, Gerontology, and Metabolism, Stanford University School of Medicine, Stanford, CA 94305, USA.
Eriko Michishita
Adam S Adler
Mara Damian
Elisabeth Berber
Meihong Lin
Ron A McCord
Kristine C L Ongaigui
Lisa D Boxer
Howard Y Chang
Katrin F Chua
Stanford University · USGeriatric Research Education and Clinical Center · USVA Palo Alto Health Care System · US

Funding

Wound Response Genes in Cancer ProgressionR01CA118750 · NCI · STANFORD UNIVERSITY · PI CHANG, HOWARD Y · 2007 to 2016
$2.9M
Molecular Mechanisms of Mammalian SIRT6 FunctionR01AG028867 · NIA · STANFORD UNIVERSITY · PI CHUA, KATRIN F · 2006 to 2010
$1.6M
Regulation of Cellular Senescence and Proliferative Capacity by Mammalian SIRT1K08AG028961 · NIA · STANFORD UNIVERSITY · PI CHUA, KATRIN F · 2006 to 2010
$864k
NCI NIH HHS R01 CA118750NIA NIH HHS K08 AG028961NIA NIH HHS R01 AG028867
6 · The paper itself

Abstract

Members of the sirtuin (SIRT) family of NAD-dependent deacetylases promote longevity in multiple organisms. Deficiency of mammalian SIRT6 leads to shortened life span and an aging-like phenotype in mice, but the underlying molecular mechanisms are unclear. Here we show that SIRT6 functions at chromatin to attenuate NF-kappaB signaling. SIRT6 interacts with the NF-kappaB RELA subunit and deacetylates histone H3 lysine 9 (H3K9) at NF-kappaB target gene promoters. In SIRT6-deficient cells, hyperacetylation of H3K9 at these target promoters is associated with increased RELA promoter occupancy and enhanced NF-kappaB-dependent modulation of gene expression, apoptosis, and cellular senescence. Computational genomics analyses revealed increased activity of NF-kappaB-driven gene expression programs in multiple Sirt6-deficient tissues in vivo. Moreover, haploinsufficiency of RelA rescues the early lethality and degenerative syndrome of Sirt6-deficient mice. We propose that SIRT6 attenuates NF-kappaB signaling via H3K9 deacetylation at chromatin, and hyperactive NF-kappaB signaling may contribute to premature and normal aging.

Indexed as

Gene Expression Regulation, DevelopmentalAcetylationAnimalsCell LineChromatinCrosses, GeneticEmbryo, MammalianHumansLongevityMiceNF-kappa BPromoter Regions, GeneticSirtuinsTranscription Factor RelAChromatinNF-kappa BRela protein, mouseSirt6 protein, mouseSirtuinsTranscription Factor RelA

Identifiers

PMID19135889
PMCPMC2757125
OpenAlexW2063084036

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.