Evidence map›Paper›PMID 19135090›Full record

ReviewAntiviral research2009

Using high-throughput genomics to study hepatitis C: what determines the outcome of infection?

Kathie-Anne Walters, Michael G Katze

Abstract readReview
In one paragraph

Review in Antiviral research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kathie-Anne WaltersDepartment of Microbiology, University of Washington, 960 Repubublican St., Seattle, WA 98109, USA. kathiw@u.washington.edu
Michael G Katze

Funding

Viral and Host cDNA Libraries from 1918 Influenza CasesP01AI058113 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI GARCIA-SASTRE, ADOLFO · 2004 to 2010
$20.3M
PROTEOMICS COREP30DA015625 · NIDA · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 2002 to 2012
$18.9M
Macaque Model and Gene Expression Profiling of SARSR01HL080621 · NHLBI · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 2006 to 2009
$2.5M
Gene Expression Profiling in Filovirus-Infected CellsR21AI063436 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 2005 to 2006
$510k
GENE EXPRESSION PROFILING OF AIDS VACCINE STRATEGIESR21AI071892 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 2006 to 2007
$491k
HEPATITIS C VIRUS AND INTERFERON--CONTROL OF PKR BY NS5AR01AI041629 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 1997 to 2001
$465k
NHLBI NIH HHS 5R01HL080621-03NHLBI NIH HHS R01 HL080621NIAID NIH HHS 5P01AI058113-050006NIAID NIH HHS 5R21AI071892-02NIAID NIH HHS P01 AI058113NIAID NIH HHS R01 AI041629NIAID NIH HHS R21 AI063436NIAID NIH HHS R21 AI071892NIDA NIH HHS 5P30DA015625-07NIDA NIH HHS P30 DA015625
6 · The paper itself

Abstract

High-throughput genomic methods are now being used to study a wide variety of viral diseases, in an effort to understand how host responses to infection can lead either to efficient elimination of the pathogen or the development of severe disease. This article reviews how gene expression studies are addressing important clinical issues related to hepatitis C virus infection, in which some 15-25% of infected individuals are able to clear the virus without treatment, while the remainder progress to chronic liver disease that can lead to cirrhosis and death. Similar methods are also being used in an effort to identify the mechanisms underlying the failure of some hepatitis C patients to respond to interferon-alpha/ribavirin therapy. By providing a detailed picture of virus-host interactions, high-throughput genomics could potentially lead to the identification of novel cellular targets for the treatment of hepatitis C.

Indexed as

Gene Expression RegulationHost-Pathogen InteractionsAnimalsGene Expression ProfilingHepatitis CHumansMicePan troglodytes

Identifiers

PMID19135090
PMCPMC2683667

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.