Evidence map›Paper›PMID 19134472›Full record

ArticleBiophysical journal2009

Magainin 2 revisited: a test of the quantitative model for the all-or-none permeabilization of phospholipid vesicles.

Sonia M Gregory, Antje Pokorny, Paulo F F Almeida

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. A unified model of transient poration induced by antimicrobial peptides.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  20. Daptomycin-Phosphatidylglycerol Domains in Lipid Membranes.Langmuir : the ACS journal of surfaces and colloids · 2017
    Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sonia M GregoryDepartment of Chemistry and Biochemistry, University of North Carolina at Wilmington, Wilmington, North Carolina, USA.
Antje Pokorny
Paulo F F Almeida
University of North Carolina Wilmington · US

Funding

Mechanisms of amphipathic and cargo delivery peptidesR15GM072507 · NIGMS · UNIVERSITY OF NORTH CAROLINA WILMINGTON · PI ALMEIDA, PAULO F · 2005 to 2012
$758k
NIGMS NIH HHS GM072507NIGMS NIH HHS R15 GM072507
6 · The paper itself

Abstract

The all-or-none kinetic model that we recently proposed for the antimicrobial peptide cecropin A is tested here for magainin 2. In mixtures of phosphatidylcholine (PC)/phosphatidylglycerol (PG) 50:50 and 70:30, release of contents from lipid vesicles occurs in an all-or-none fashion and the differences between PC/PG 50:50 and 70:30 can be ascribed mainly to differences in binding, which was determined independently and is approximately 20 times greater to PC/PG 50:50 than to 70:30. Only one variable parameter, beta, corresponding to the ratio of the rates of pore opening to pore closing, is used to fit dye release kinetics from these two mixtures, for several peptide/lipid ratios ranging from 1:25 to 1:200. However, unlike for cecropin A where it stays almost constant, beta increases five times as the PG content of the vesicles increases from 30 to 50%. Thus, magainin 2 is more sensitive to anionic lipid content than cecropin A. But overall, magainin follows the same all-or-none kinetic model as cecropin A in these lipid mixtures, with slightly different parameter values. When the PG content is reduced to 20 mol %, dye release becomes very low; the mechanism appears to change, and is consistent with a graded kinetic model. We suggest that the peptide may be inducing formation of PG domains. In either mechanism, no peptide oligomerization occurs and magainin catalyzes dye release in proportion to its concentration on the membrane in a peptide state that we call a pore. We envision this structure as a chaotic or stochastic type of pore, involving both lipids and peptides, not a well-defined, peptide-lined channel.

Indexed as

Models, ChemicalAlgorithmsAntimicrobial Cationic PeptidesFluoresceinsFluorescenceKineticsMagaininsPhosphatidylcholinesPhosphatidylglycerolsProtein BindingUnilamellar LiposomesXenopus Proteins6-carboxyfluoresceinAntimicrobial Cationic Peptidescecropin AFluoresceinsmagainin 2 peptide, XenopusMagaininsPhosphatidylcholinesPhosphatidylglycerolsUnilamellar LiposomesXenopus Proteins

Identifiers

PMID19134472
PMCPMC2710023
OpenAlexW2066343236

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.