Evidence map›Paper›PMID 19134194›Full record

ArticleJournal of experimental & clinical cancer research : CR2009

Tissue microarray analysis of eIF4E and its downstream effector proteins in human breast cancer.

Heather E Kleiner, Prasad Krishnan, Jesse Tubbs, Mark Smith, Carol Meschonat, Runhua Shi, Mary Lowery-Nordberg, Patrick Adegboyega, Marcia Unger, James Cardelli and 5 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Journal of experimental & clinical cancer research : CR, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  6. Expression of FOXP3, CD68, and CD20 at diagnosis in the microenvironment of classical Hodgkin lymphoma is predictive of outcome.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2013
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Heather E KleinerDept, of Pharmacology, Toxicology, and Neuroscience, Breast Cancer Focus Group, Feist-Weiller Cancer Center, Shreveport & LSUHSC-Shreveport, Louisiana, LA 71130, USA. hklein@lsuhsc.edu
Prasad Krishnan
Jesse Tubbs
Mark Smith
Carol Meschonat
Runhua Shi
Mary Lowery-Nordberg
Patrick Adegboyega
Marcia Unger
James Cardelli
Quyen Chu
J Michael Mathis
John Clifford
Arrigo De Benedetti
Benjamin D L Li
Louisiana State University Health Sciences Center Shreveport · USLouisiana State University Health Sciences Center New Orleans · US

Funding

Effects of natural coumarins on mammary carcinogenesisK22CA102005 · NCI · LOUISIANA STATE UNIV HSC SHREVEPORT · PI KLEINER-HANCOCK, HEATHER E · 2005 to 2007
$465k
NCI NIH HHS 1K22CA102005-01A2
6 · The paper itself

Abstract

backgroundEukaryotic initiation factor 4E (eIF4E) is elevated in many cancers and is a prognostic indicator in breast cancer. Many pro-tumorigenic proteins are selectively translated via eIF4E, including c-Myc, cyclin D1, ornithine decarboxylase (ODC), vascular endothelial growth factor (VEGF) and Tousled-like kinase 1B (TLK1B). However, western blot analysis of these factors in human breast cancer has been limited by the availability of fresh frozen tissue and the labor-intensive nature of the multiple assays required. Our goal was to validate whether formalin-fixed, paraffin-embedded tissues arranged in a tissue microarray (TMA) format would be more efficient than the use of fresh-frozen tissue and western blot to test multiple downstream gene products.

resultsBreast tumor TMAs were stained immunohistochemically and quantitated using the ARIOL imaging system. In the TMAs, eIF4E levels correlated strongly with c-Myc, cyclin D1, TLK1B, VEGF, and ODC. Western blot comparisons of eIF4E vs. TLK1B were consistent with the immunohistochemical results. Consistent with our previous western blot results, eIF4E did not correlate with node status, ER, PR, or HER-2/neu.

conclusionWe conclude that the TMA technique yields similar results as the western blot technique and can be more efficient and thorough in the evaluation of several products downstream of eIF4E.

Indexed as

Signal TransductionTissue Array AnalysisBiomarkers, TumorBreast NeoplasmsEukaryotic Initiation Factor-4EHumansProtein Serine-Threonine KinasesBiomarkers, TumorEukaryotic Initiation Factor-4EProtein Serine-Threonine KinasesTLK1 protein, human

Identifiers

PMID19134194
PMCPMC2631459
OpenAlexW2167437047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.