Evidence map›Paper›PMID 19132829›Full record

ArticleJournal of medicinal chemistry2009

Therapeutic index of gramicidin S is strongly modulated by D-phenylalanine analogues at the beta-turn.

Concepción Solanas, Beatriz G de la Torre, María Fernández-Reyes, Clara M Santiveri, M Angeles Jiménez, Luis Rivas, Ana I Jiménez, David Andreu, Carlos Cativiela

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 57 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structure, toxicity and antibiotic activity of gramicidin S and derivatives.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2016
    Article
  7. Efficacy of cecropin A-melittin peptides on a sepsis model of infection by pan-resistant Acinetobacter baumannii.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2011
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Concepción SolanasDepartamento de Química Orgánica, Instituto de Ciencia de Materiales de Aragón, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain.
Beatriz G de la Torre
María Fernández-Reyes
Clara M Santiveri
M Angeles Jiménez
Luis Rivas
Ana I Jiménez
David Andreu
Carlos Cativiela
Instituto de Química Física Blas Cabrera · ESUniversidad de Zaragoza · ESCentro de Investigaciones Biológicas Margarita Salas · ESConsejo Superior de Investigaciones Científicas · ESPompeu Fabra University · ES

Funding

Intramural NIH HHSNCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400
6 · The paper itself

Abstract

Analogues of the cationic antimicrobial peptide gramicidin S (GS), cyclo(Val-Orn-Leu-D-Phe-Pro)2, with d-Phe residues replaced by different (restricted mobility, mostly) surrogates have been synthesized and used in SAR studies against several pathogenic bacteria. While all D-Phe substitutions are shown by NMR to preserve the overall beta-sheet conformation, they entail subtle structural alterations that lead to significant modifications in biological activity. In particular, the analogue incorporating D-Tic (1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid) shows a modest but significant increase in therapeutic index, mostly due to a sharp decrease in hemolytic effect. The fact that NMR data show a shortened distance between the D-Tic aromatic ring and the Orn delta-amino group may help explain the improved antibiotic profile of this analogue.

Indexed as

Acinetobacter baumanniiAmino Acid SubstitutionAnimalsErythrocytesGramicidinHemolysisHemolytic AgentsListeria monocytogenesMicrobial Sensitivity TestsNuclear Magnetic Resonance, BiomolecularPhenylalanineProtein Structure, SecondarySheepStaphylococcus aureusStructure-Activity RelationshipTetrahydroisoquinolines1,2,3,4-tetrahydroisoquinoline carboxylic acidGramicidinHemolytic AgentsPhenylalanineTetrahydroisoquinolines

Identifiers

PMID19132829
PMCPMC2659738
OpenAlexW2114155530

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.