Evidence map›Paper›PMID 19131553›Full record

ArticleBlood2009

Gene expression profiling of ATL patients: compilation of disease-related genes and evidence for TCF4 involvement in BIRC5 gene expression and cell viability.

Cynthia A Pise-Masison, Michael Radonovich, Kathleen Dohoney, John C Morris, Deirdre O'Mahony, Min-Jung Lee, Jane Trepel, Thomas A Waldmann, John E Janik, John N Brady

Open access · greenAbstract read
In one paragraph

Article in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 71 citations in OpenAlex.

  1. Trial
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  8. Mechanisms of Oncogenesis by HTLV-1 Tax.Pathogens (Basel, Switzerland) · 2020
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Survivin-Based Treatment Strategies for Squamous Cell Carcinoma.International journal of molecular sciences · 2018
    Review
  14. [Screening and verification of key genes in T-cell acute lymphoblastic leukemia].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2018
    Article
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Cynthia A Pise-MasisonLaboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Michael Radonovich
Kathleen Dohoney
John C Morris
Deirdre O'Mahony
Min-Jung Lee
Jane Trepel
Thomas A Waldmann
John E Janik
John N Brady
Max Planck Institute for Metabolism Research · DECenter for Cancer Research · USNational Institutes of Health · US

Funding

IL-2:IL-15 : implications for cancer therapy (Investigator -Initiated Project)ZIASC004002 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI WALDMANN, THOMAS · 2009 to 2022
$22.9M
Signal Transduction Events and the Regulation of Cell GrowthZICSC006743 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI TREPEL, JANE B · 2009 to 2023
$13.8M
Immunoregulatory Cell Receptor Defects--Leukemia/LymphomZ01SC004002 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI WALDMANN, THOMAS A · 1996 to 2008
$6.1M
Receptor-directed TherapyZ01BC010603 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI JANIK, JOHN · 2004 to 2008
$2.7M
Receptor-directed TherapyZIABC010603 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI JANIK, JOHN · 2009 to 2011
$2.6M
SIGNAL TRANSDUCTION EVENTS AND THE REGULATION OF CELL GROWTHZ01SC006743 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI TREPEL, JANE B · 1996 to 2008
$1.9M
Expression Profiles in ATL PatientsZIABC011308 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MASISON, CYNTHIA · 2010 to 2010
$185k
Expression profiles in ATL PatientsZIABC011164 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BRADY, JOHN N. · 2009 to 2009
$177k
Intramural NIH HHS
6 · The paper itself

Abstract

Adult T-cell leukemia/lymphoma (ATL) is an aggressive and fatal disease. We have examined 32 patients with smoldering, chronic, lymphoma and acute leukemia using Affymetrix HG-U133A2.0 arrays. Using the BRB array program, we identified genes differentially expressed in leukemia cells compared with normal lymphocytes. Several unique genes were identified that were overexpressed in leukemic cells, including TNFSF11, RGS13, MAFb, CSPG2, C/EBP-alpha, and TCF4; 200 of the most highly overexpressed ATL genes were analyzed by the Pathway Studio, version 4.0 program. ATL leukemia cells were characterized by an increase in genes linked to "central" genes CDC2/cyclin B1, SYK/LYN, proliferating cell nuclear antigen, and BIRC5. Because of its potential therapeutic importance, we focused our studies on the regulation and function of BIRC5, whose expression was increased in 13 of 14 leukemia samples. TCF4 reporter assays and transfection of DN-TCF4 demonstrated that TCF4 regulates BIRC5 gene expression. Functionally, transfection of ATL cells with BIRC5 shRNA decreased BIRC5 expression and cell viability 80%. Clinical treatment of ATL patients with Zenapax or bortezomib decreased BIRC5 expression and cell viability. These experiments represent the first direct experimental evidence that BIRC5 plays an important role in ATL cell viability and provides important insight into ATL genesis and potential targeted therapies.

Indexed as

AdultAgedAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAntineoplastic Combined Chemotherapy ProtocolsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBoronic AcidsBortezomibCD4-Positive T-LymphocytesCell SurvivalDaclizumabDNA-Binding ProteinsDown-RegulationFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBIRC5 protein, humanBoronic AcidsBortezomibDaclizumabDNA-Binding ProteinsImmunoglobulin GInhibitor of Apoptosis ProteinsMicrotubule-Associated ProteinsPyrazinesSurvivinTCF4 protein, humanTranscription Factor 4Transcription Factors

Identifiers

PMID19131553
PMCPMC2673128
OpenAlexW2004173971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.