Evidence map›Paper›PMID 19131108›Full record

ArticleCell calcium2009

Alternative splicing of RyR1 alters the efficacy of skeletal EC coupling.

Takashi Kimura, John D Lueck, Peta J Harvey, Suzy M Pace, Noriaki Ikemoto, Marco G Casarotto, Robert T Dirksen, Angela F Dulhunty

Abstract read
In one paragraph

Article in Cell calcium, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
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  10. Frontiers in neurology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Takashi KimuraHyogo College of Medicine, 1-1 Mukogawa-cho Nishinomiya, Hyogo 663-8501, Japan.
John D Lueck
Peta J Harvey
Suzy M Pace
Noriaki Ikemoto
Marco G Casarotto
Robert T Dirksen
Angela F Dulhunty

Funding

Control of Calcium Movements in MuscleR01AR044657 · NIAMS · UNIVERSITY OF ROCHESTER · PI DIRKSEN, ROBERT T · 2002 to 2011
$3.3M
CONTROL OF CALCIUM MOVEMENTS IN MUSCLER29AR044657 · NIAMS · UNIVERSITY OF ROCHESTER · PI DIRKSEN, ROBERT T · 1997 to 2001
$215k
NIAMS NIH HHS AR44657NIAMS NIH HHS R01 AR044657NIAMS NIH HHS R29 AR044657
6 · The paper itself

Abstract

Alternative splicing of ASI residues (Ala(3481)-Gln(3485)) in the skeletal muscle ryanodine receptor (RyR1) is developmentally regulated: the residues are present in adult ASI(+)RyR1, but absent in the juvenile ASI(-)RyR1 which is over-expressed in adult myotonic dystrophy type 1 (DM1). Although this splicing switch may influence RyR1 function in developing muscle and DM1, little is known about the properties of the splice variants. We examined excitation-contraction (EC) coupling and the structure and interactions of the ASI domain (Thr(3471)-Gly(3500)) in the splice variants. Depolarisation-dependent Ca(2+) release was enhanced by >50% in myotubes expressing ASI(-)RyR1 compared with ASI(+)RyR1, although DHPR L-type currents and SR Ca(2+) content were unaltered, while ASI(-)RyR1 channel function was actually depressed. The effect on EC coupling did not depend on changes in ASI domain secondary structure. Probing RyR1 function with peptides possessing the ASI domain sequence indicated that the domain contributes to an inhibitory module in RyR1. The action of the peptide depended on a sequence of basic residues and their alignment in an alpha-helix adjacent to the ASI splice site. This is the first evidence that the ASI residues contribute to an inhibitory module in RyR1 that influences EC coupling. Implications for development and DM1 are discussed.

Indexed as

Muscle ContractionAlternative SplicingAmino Acids, BasicAmino Acid SequenceAnimalsBone and BonesCalciumIon Channel GatingKineticsMagnetic Resonance SpectroscopyMiceMolecular Sequence DataMuscle Fibers, SkeletalPeptidesRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumAmino Acids, BasicCalciumPeptidesRyanodine Receptor Calcium Release Channel

Identifiers

PMID19131108
PMCPMC2743929

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.