Evidence map›Paper›PMID 19129230›Full record

ArticleNucleic acids research2009

Molecular characterization of Mybbp1a as a co-repressor on the Period2 promoter.

Yasuhiro Hara, Yoshiaki Onishi, Katsutaka Oishi, Koyomi Miyazaki, Akiyoshi Fukamizu, Norio Ishida

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Prognostic relevance of Period1 (Per1) and Period2 (Per2) expression in human gastric cancer.International journal of clinical and experimental pathology · 2014
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Epigeneitc silencing of ribosomal RNA genes by Mybbp1a.Journal of biomedical science · 2012
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yasuhiro HaraClock Cell Biology, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan.
Yoshiaki Onishi
Katsutaka Oishi
Koyomi Miyazaki
Akiyoshi Fukamizu
Norio Ishida
National Institute of Advanced Industrial Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clock comprises transcriptional feedback loops of clock genes. Cryptochromes are essential components of the negative feedback loop in mammals as they inhibit CLOCK-BMAL1-mediated transcription. We purified mouse CRY1 (mCRY1) protein complexes from Sarcoma 180 cells to determine their roles in circadian gene expression and discovered that Myb-binding protein 1a (Mybbp1a) interacts with mCRY1. Mybbp1a regulates various transcription factors, but its role in circadian gene expression is unknown. We found that Mybbp1a functions as a co-repressor of Per2 expression and repressed Per2 promoter activity in reporter assays. Chromatin immunoprecipitation (ChIP) assays revealed endogenous Mybbp1a binding to the Per2 promoter that temporally matched that of mCRY1. Furthermore, Mybbp1a binding to the Per2 promoter correlated with the start of the down-regulation of Per2 expression and with the dimethylation of histone H3 Lys9, to which it could also bind. These findings suggest that Mybbp1a and mCRY1 can form complexes on the Per2 promoter that function as negative regulators of Per2 expression.

Indexed as

Gene Expression RegulationAnimalsCarrier ProteinsCell Cycle ProteinsCell LineCircadian RhythmCLOCK ProteinsCryptochromesDNA-Binding ProteinsFlavoproteinsHistonesLysineMiceNuclear ProteinsPeriod Circadian ProteinsPromoter Regions, GeneticCarrier ProteinsCell Cycle ProteinsClock protein, mouseCLOCK ProteinsCry1 protein, mouseCryptochromesDNA-Binding ProteinsFlavoproteinsHistonesLysineMybbp1a protein, mouseNuclear ProteinsPer2 protein, mousePeriod Circadian ProteinsRepressor ProteinsRNA-Binding ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID19129230
PMCPMC2651808
OpenAlexW2027622242

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.