Evidence map›Paper›PMID 19127411›Full record

ArticleJournal of inherited metabolic disease2009

A PEX10 defect in a patient with no detectable defect in peroxisome assembly or metabolism in cultured fibroblasts.

S J Steinberg, A Snowden, N E Braverman, L Chen, P A Watkins, P T Clayton, K D R Setchell, J E Heubi, G V Raymond, A B Moser and 1 more

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Journal of inherited metabolic disease, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Tandem mass spectrometry of serum cholestanoic (CJournal of mass spectrometry and advances in the clinical lab · 2024
    Article
  4. Article
  5. Peroxisome Biogenesis Disorders.Advances in experimental medicine and biology · 2020
    Review
  6. Article
  7. Article
  8. Peroxisome biogenesis disorders.Translational science of rare diseases · 2016
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

S J SteinbergNeurogenetics, Kennedy Krieger Institute, Baltimore, Maryland 21205, USA. Steven.Steinberg@KennedyKrieger.org
A Snowden
N E Braverman
L Chen
P A Watkins
P T Clayton
K D R Setchell
J E Heubi
G V Raymond
A B Moser
H W Moser
Kennedy Krieger Institute · USCincinnati Children's Hospital Medical Center · USGreat Ormond Street Hospital · GBJohns Hopkins University · USMontreal Children's Hospital · CA

Funding

VERY LONG CHAIN FATTY ACYL-COA SYNTHETASE IN ADRENOLEUKODYSTROPHYP01HD010981 · NICHD · KENNEDY KRIEGER CHILDRENS HOSPITAL · PI SMITH, KIRBY D · 1985 to 2006
$11.5M
Cincinnati Center for Clinical and Translational Sciences and TrainingUL1TR000077 · NCATS · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E. · 2012 to 2014
$9.9M
NCATS NIH HHS UL1 TR000077NCRR NIH HHS RR08084NICHD NIH HHS HD010981-29
6 · The paper itself

Abstract

Zellweger spectrum disorders (ZSD) are diagnosed by biochemical assay in blood, urine and cultured fibroblasts and PEX gene mutation identification. In most cases studies in fibroblasts corroborate results obtained in body fluids. In 1996 Clayton and colleagues described a 10-year old girl with evidence of a peroxisome disorder, based on elevated bile acid metabolites and phytanate. At the time it was not possible to distinguish whether she had a ZSD or a single peroxisomal protein defect. Studies in our laboratory showed that she also had elevated plasma pipecolate, supporting the former diagnosis. Despite the abnormal metabolites detected in blood (phytanate, bile acid intermediates and pipecolate), analysis of multiple peroxisomal pathways in fibroblasts yielded normal results. In addition, she had a milder clinical phenotype than usually associated with ZSD. Since complementation analysis to determine the gene defect was not possible, we screened this patient following the PEX Gene Screen algorithm (PGS). The PGS provides a template for sequencing PEX gene exons independent of complementation analysis. Two mutations in PEX10 were identified, a frameshift mutation inherited from her father and a de novo missense mutation in a conserved functional domain on the other allele. This case highlights that molecular analysis may be essential to the diagnosis of patients at the milder end of the ZSD spectrum. Furthermore, it supports the concept that some tissues are less affected by certain PEX gene defects than brain and liver.

Indexed as

AdolescentAmino Acid SequenceBase SequenceCells, CulturedFemaleFibroblastsHumansMolecular Sequence DataMutationPedigreePeroxinsPeroxisomesReceptors, Cytoplasmic and NuclearZellweger SyndromePeroxinsPEX10 protein, humanReceptors, Cytoplasmic and Nuclear

Identifiers

PMID19127411
OpenAlexW2107602976

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.