Evidence map›Paper›PMID 19125330›Full record

ArticleDigestive diseases and sciences2009

The serotonin transporter polymorphism rs25531 is associated with irritable bowel syndrome.

Ruth Kohen, Monica E Jarrett, Kevin C Cain, Sang-Eun Jun, Grace P Navaja, Sarah Symonds, Margaret M Heitkemper

Open access · greenAbstract read
In one paragraph

Article in Digestive diseases and sciences, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Tryptophan Metabolism and Gut-Brain Homeostasis.International journal of molecular sciences · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Genetic epidemiology of irritable bowel syndrome.World journal of gastroenterology · 2015
    Review
  14. Review
  15. Review
  16. Molecular basis of the irritable bowel syndrome.World journal of gastroenterology · 2014
    Review
  17. Article
  18. Review
  19. Genetics of human gastrointestinal sensation.Neurogastroenterology and motility · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ruth KohenDepartment of Psychiatry & Behavioral Sciences, University of Washington, Seattle, WA 98195-6560, USA. ruko@u.washington.edu
Monica E Jarrett
Kevin C Cain
Sang-Eun Jun
Grace P Navaja
Sarah Symonds
Margaret M Heitkemper
Geriatric Research Education and Clinical Center · USNeurobehavioral Systems · USUniversity of Washington · USBehavioral Tech Research, Inc. · US

Funding

NURSING STUDY OF GUT FUNCTION IN MENSTRUATING WOMENR01NR001094 · NINR · UNIVERSITY OF WASHINGTON · PI HEITKEMPER, MARGARET MCLEAN · 1986 to 2013
$5.3M
Partnership CoreP30NR004001 · NINR · UNIVERSITY OF WASHINGTON · PI KILLIEN, MARCIA G · 1994 to 2008
$3.7M
NINR NIH HHS NR01094NINR NIH HHS P30 NR004001NINR NIH HHS P30 NR04001NINR NIH HHS R01 NR001094
6 · The paper itself

Abstract

Irritable bowel syndrome is a frequent gastrointestinal disorder of unknown etiology. The serotonin transporter regulates the intensity and duration of serotonin signaling in the gut and is, therefore, an attractive candidate gene for irritable bowel syndrome. Previous studies investigating the 5-HTTLPR and Stin2 VNTR polymorphisms of the serotonin transporter have proved inconclusive. In this exploratory study we therefore expanded the search for a possible association of the serotonin transporter with irritable bowel syndrome to include not only the 5-HTTLPR and Stin2 VNTR length polymorphisms, but also the functional single nucleotide polymorphism rs25531. We genotyped 186 patients with irritable bowel syndrome and 50 healthy control subjects raging in age from 18 to 70 years. Carriers of the rare G allele of rs25531 had approximately threefold increased odds of irritable bowel syndrome compared with healthy controls (OR 3.3, 95% CI 1.1-9.6). Our findings suggest that further investigation of the possible role of the serotonin transporter in the etiology of IBS is warranted.

Indexed as

Polymorphism, Single NucleotideAdultCase-Control StudiesChi-Square DistributionFemaleGene FrequencyGenetic Predisposition to DiseaseHumansIrritable Bowel SyndromeMaleMiddle AgedOdds RatioPhenotypeRisk AssessmentRisk FactorsSerotonin Plasma Membrane Transport ProteinsSerotonin Plasma Membrane Transport ProteinsSLC6A4 protein, human

Identifiers

PMID19125330
PMCPMC2937164
OpenAlexW2038415162

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.