Evidence map›Paper›PMID 19121997›Full record

ArticleThe Journal of biological chemistry2009

TRAM1 participates in human cytomegalovirus US2- and US11-mediated dislocation of an endoplasmic reticulum membrane glycoprotein.

Kristina Oresic, Caroline L Ng, Domenico Tortorella

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kristina OresicDepartment of Microbiology, Mount Sinai School of Medicine, New York, New York 10029, USA.
Caroline L Ng
Domenico Tortorella
Icahn School of Medicine at Mount Sinai · US

Funding

Technological Development ComponentU19AI062623 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI MORAN, THOMAS M · 2004 to 2009
$21.3M
Down-regulation of MHC class l molecules by HCMV US2R01AI060905 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI TORTORELLA, DOMENICO · 2005 to 2009
$1.8M
NIAID NIH HHS AI060905NIAID NIH HHS U19 AI062623
6 · The paper itself

Abstract

The human cytomegalovirus proteins US2 and US11 have co-opted endoplasmic reticulum (ER) quality control to facilitate the destruction of major histocompatibility complex class I heavy chains. The class I heavy chains are dislocated from the ER to the cytosol, where they are deglycosylated and subsequently degraded by the proteasome. We examined the role of TRAM1 (translocating chain-associated membrane protein-1) in the dislocation of class I molecules using US2- and US11-expressing cells. TRAM1 is an ER protein initially characterized for its role in processing nascent polypeptides. Co-immunoprecipitation studies demonstrated that TRAM1 can complex with the wild type US2 and US11 proteins as well as deglycosylated and polyubiquitinated class I degradation intermediates. In studies using US2- and US11-TRAM1 knockdown cells, we observed an increase in levels of class I heavy chains. Strikingly, increased levels of glycosylated heavy chains were observed in TRAM1 knockdown cells when compared with control cells in a pulse-chase experiment. In fact, US11-mediated class I dislocation was more sensitive to the lack of TRAM1 than US2. These results provide further evidence that these viral proteins may utilize distinct complexes to facilitate class I dislocation. For example, US11-mediated class I heavy chain degradation requires Derlin-1 and SEL1L, whereas signal peptide peptidase is critical for US2-induced class I destabilization. In addition, TRAM1 can complex with the dislocation factors Derlin-1 and signal peptide peptidase. Collectively, the data support a model in which TRAM1 functions as a cofactor to promote efficient US2- and US11-dependent dislocation of major histocompatibility complex class I heavy chains.

Indexed as

Aspartic Acid EndopeptidasesAstrocytomaEndoplasmic ReticulumGlycosylationHistocompatibility Antigens Class IHumansImmunoprecipitationMembrane GlycoproteinsMembrane ProteinsMembrane Transport ProteinsProteinsProtein TransportReverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingAspartic Acid EndopeptidasesDERL1 protein, humanHistocompatibility Antigens Class IMembrane GlycoproteinsMembrane ProteinsMembrane Transport ProteinsProteinsRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingSEL1L protein, humansignal peptide peptidaseTRAM1 protein, humanUbiquitinUS11 protein, herpesvirusUS2 protein, VaricellovirusViral Envelope ProteinsViral Proteins

Identifiers

PMID19121997
PMCPMC2645836
OpenAlexW2020799468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.