Evidence map›Paper›PMID 19121678›Full record

ArticleTransactions of the Royal Society of Tropical Medicine and Hygiene2008

Cellular reporter screens for inhibitors of Burkholderia pseudomallei targets in Pseudomonas aeruginosa.

Donald T Moir, Ming Di, Richard A Moore, Herbert P Schweizer, Donald E Woods

Open access · greenAbstract read
In one paragraph

Article in Transactions of the Royal Society of Tropical Medicine and Hygiene, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Donald T MoirMicrobiotix, Inc., Worcester, MA, USA. dmoir@microbiotix.com
Ming Di
Richard A Moore
Herbert P Schweizer
Donald E Woods
Microbiotix (United States) · USUniversity of Calgary · CAColorado State University · US

Funding

Discovery of B. pseudomallei therapeutics for BiodefenseR44AI056644 · NIAID · MICROBIOTIX, INC · PI MOIR, DONALD T · 2006 to 2008
$3.2M
Discovery of B. pseudomallei Therapeutics for BiodefenseR43AI056644 · NIAID · OSCIENT PHARMACEUTICALS CORPORATION · PI MOIR, DONALD T · 2003 to 2004
$713k
NIAID NIH HHS AI056644NIAID NIH HHS R43 AI056644NIAID NIH HHS R44 AI056644
6 · The paper itself

Abstract

To facilitate the discovery of new therapeutics for Burkholderia pseudomallei infections, we have developed cellular reporter screens for inhibitors of B. pseudomallei targets in the surrogate host Pseudomonas aeruginosa. Pseudomonas aeruginosa strains carrying deletions of essential genes were engineered to be dependent on the isopropyl-beta-D-thiogalactopyranoside (IPTG)-regulated expression of their B. pseudomallei orthologues on a broad-host-range plasmid. Pseudomonas aeruginosa genes which are upregulated in response to depletion of each target gene product, were fused to the Photorhabdus luminescens luxCDABE operon via pGSV3-lux-Sp(R) to generate reporter strains with increased bioluminescence upon target inhibition. A total of 11 of 19 B. pseudomallei genes complemented deletions of their orthologues in P. aeruginosa. The dependence of growth on IPTG levels varied from complete dependence (ftsQ, gyrA, glmU, secA) to slower growth in the absence of IPTG (coaD, efp, mesJ), to apparently normal growth in the absence of IPTG (ligA, lpxA, folA, ipk). Reporter screening strains have been constructed for three gene targets (gyrA, glmU, secA), and one (gyrA) has been applied to 68,000 compounds resulting in a primary hit rate of 0.5% and a confirmed hit rate of 0.06%, including several fluoroquinolones. These results provide proof of principle for surrogate cellular reporter screens as a useful approach to identify inhibitors of essential gene products.

Indexed as

Burkholderia pseudomalleiGene DeletionGene Expression Regulation, BacterialHumansOligonucleotide Array Sequence AnalysisOperonPseudomonas aeruginosaSequence Analysis, DNA

Identifiers

PMID19121678
PMCPMC2709407
OpenAlexW2015102059

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.