Evidence map›Paper›PMID 19121403›Full record

ArticleJournal of pharmacological and toxicological methods

Flow cytometric analysis of BrdU incorporation as a high-throughput method for measuring adult neurogenesis in the mouse.

Darrick T Balu, Georgia E Hodes, Tiffany E Hill, Nancy Ho, Zia Rahman, Corey N Bender, Robert H Ring, Jason M Dwyer, Sharon Rosenzweig-Lipson, Zoe A Hughes and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of pharmacological and toxicological methods. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

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  12. Diabetes and stem cell function.BioMed research international · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Darrick T BaluDepartment of Pharmacology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Georgia E Hodes
Tiffany E Hill
Nancy Ho
Zia Rahman
Corey N Bender
Robert H Ring
Jason M Dwyer
Sharon Rosenzweig-Lipson
Zoe A Hughes
Lee E Schechter
Irwin Lucki
Princeton University · USUniversity of Pennsylvania · US

Funding

TRAINING PROGRAM IN NEUROPSYCHOPHARMACOLOGY-PREDOCTORALT32MH014654 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BERRETTINI, WADE H · 1985 to 2021
$5.0M
Regulation of Neurogenesis by Stress and AntidepressantsU01MH072832 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI LUCKI, IRWIN · 2005 to 2007
$1.7M
NIMH NIH HHS MH72832NIMH NIH HHS T32 MH014654NIMH NIH HHS U01 MH072832
6 · The paper itself

Abstract

introductionThe generation of new neurons occurs throughout adulthood in discrete brain regions, and may be regulated by neuropsychiatric diseases and therapeutic drug treatments. Most current methods that study this process measure the labeling of newborn cells by 5-bromo-2-deoxyuridine (BrdU) using immunohistochemical methods followed by the microscopic counting of BrdU positive cells. This method is time consuming and labor intensive, typically taking several weeks to analyze.

methodsTherefore, we characterized a method to measure BrdU incorporation in the adult mouse hippocampus in vivo by using flow cytometry, which normally allows analysis of data within a single day.

resultsThe present study compared multiple BrdU dosing and loading protocols to determine a dosing strategy that produced the best signal to noise ratio. BrdU incorporation was also compared across different brain regions. The method was sensitive to a number of experimental disease manipulations. Induction of type-1 diabetes and depletion of norepinephrine reduced hippocampal cell proliferation. In contrast, chronic administration of electroconvulsive shock, a somatic treatment for depression, as well as chronic treatment with the antidepressant fluoxetine elevated hippocampal cell proliferation. This increase in cell proliferation with fluoxetine was detected as early as 14 days into treatment. Moreover, comparing measures of cell proliferation obtained by immunohistochemical and flow cytometric methods within the same animals were convergent and significantly correlated to each other. Flow cytometry was also sufficiently sensitive to quantify the survival of newly born cells. DISCUSSION: These experiments validate the utility of flow cytometry in analyzing hippocampal cell proliferation and survival in a reliable and high-throughput fashion. The speedy analysis afforded by flow cytometry lends itself to be utilized in novel drug discovery and physiology.

Indexed as

AnimalsAntidepressive AgentsBenzylaminesBrainBromodeoxyuridineCell DifferentiationCell SurvivalDiabetes Mellitus, ExperimentalFlow CytometryFluoxetineHippocampusImmunohistochemistryMiceMice, Inbred C57BLMice, Inbred StrainsNeurogenesisAntidepressive AgentsBenzylaminesBromodeoxyuridineDSP 4FluoxetineNeurotoxinsNorepinephrineSelective Serotonin Reuptake Inhibitors

Identifiers

PMID19121403
PMCPMC2701659
OpenAlexW2087745940

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.