Evidence map›Paper›PMID 19120644›Full record

ArticleJournal of applied microbiology2008

Genetic changes that correlate with the pine-oil disinfectant-reduced susceptibility mechanism of Staphylococcus aureus.

R Lamichhane-Khadka, J T Riordan, A Delgado, A Muthaiyan, T D Reynolds, B J Wilkinson, J E Gustafson

Open access · greenAbstract read
In one paragraph

Article in Journal of applied microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

R Lamichhane-KhadkaDepartment of Biology, New Mexico State University, Las Cruces, NM 88003-8001, USA.
J T Riordan
A Delgado
A Muthaiyan
T D Reynolds
B J Wilkinson
J E Gustafson
New Mexico State University · USIllinois State University · US

Funding

ZUNI HEALTH INITIATIVE-PILOT STUDYP20RR016480 · NCRR · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI ZHANG, PENG F · 2001 to 2011
$33.7M
Translational Control in the Hepatitis C VirusS06GM008136 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI KUEHN, GLENN D · 1989 to 2011
$23.2M
RISE PROGRAM AT NEW MEXICO STATE UNIVERSITYR25GM061222 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI HOUSTON, JESSICA PEREA, REDDI, LAKSHMI · 2000 to 2022
$21.3M
Undergraduate Biomedical Research Training at New Mexico State Univ., Las CrucesT34GM007667 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI UNGUEZ, GRACIELA ALEXANDRA · 1985 to 2022
$13.6M
Novel antibiotic resistance mechanisms in S. aureusR15AI054382 · NIAID · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI GUSTAFSON, JOHN E · 2002 to 2002
$143k
Howard Hughes Medical Institute 52005881NCRR NIH HHS P20 RR016480NCRR NIH HHS P20RR016480NIAID NIH HHS 1R15AI054382-01NIAID NIH HHS R15 AI054382NIGMS NIH HHS R25 GM061222NIGMS NIH HHS R25 GM07667NIGMS NIH HHS S06 GM008136NIGMS NIH HHS S06 GM61222NIGMS NIH HHS T34 GM007667
6 · The paper itself

Abstract

aimsTo identify factors associated with the Staphylococcus aureus pine-oil disinfectant-reduced-susceptibility (PD(RS)) mechanism and to describe one possible PD(RS) model. METHODS AND

resultsComparative genomic sequencing (CGS) and microarray analysis were utilized to detect mutations and transcriptome alterations that occur in a S. aureus PD(RS) mutant. Mutant analysis, antimicrobial gradient plates, growth studies and 3-hydroxy-3-methylglutaryl coenzyme A synthase assays were then performed to confirm the biological consequences of the 'omics' alterations detected in a PD(RS) mutant. CGS uncovered three mutations in a PD(RS) mutant in a(n): alcohol dehydrogenase (adh), catabolite control protein A (ccpA) and an NADPH-flavin oxidoreductase (frp). These mutations lead to increased growth rates; increased transcription of an NAD-dependent D-lactate dehydrogenase gene (ddh); and increased flux through the mevalonate pathway. PD(RS) mutants demonstrated reduced susceptibility to bacitracin and farnesol, and one PD(RS) mutant displayed upregulation of bacA, a bacitracin-resistance gene. Collectively, this evidence demonstrates altered undecaprenol metabolism in PD(RS) mutants.

conclusionsThe PD(RS) mechanism proposed results from increased catabolic capabilities and increased flux through the mevalonate pathway as well as altered bactoprenol physiology. SIGNIFICANCE AND IMPACT OF THE STUDY: A novel mechanism that bacteria utilize to overcome the killing effects of PD formulations is proposed that is unique from the PD(RS) mechanism of the enterobacteraciae.

Indexed as

Bacterial ProteinsDisinfectantsDNA Mutational AnalysisDrug Resistance, BacterialHydroxymethylglutaryl-CoA SynthaseLactate DehydrogenasesMicroarray AnalysisMicrobial Sensitivity TestsPinusPlant OilsRepressor ProteinsStaphylococcus aureusBacterial Proteinscatabolite control proteins, bacteriaDisinfectantsD-lactate dehydrogenaseHydroxymethylglutaryl-CoA SynthaseLactate DehydrogenasesPlant OilsRepressor Proteins

Identifiers

PMID19120644
PMCPMC2697845
OpenAlexW2082278859

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.