Evidence map›Paper›PMID 19119139›Full record

ArticleThe Journal of biological chemistry2009

A DNA polymerase-{alpha}{middle dot}primase cofactor with homology to replication protein A-32 regulates DNA replication in mammalian cells.

Darren E Casteel, Shunhui Zhuang, Ying Zeng, Fred W Perrino, Gerry R Boss, Mehran Goulian, Renate B Pilz

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 166 citations in OpenAlex.

  1. Article
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  7. Cytotoxicity and Multi-Enzyme Inhibition ofPlants (Basel, Switzerland) · 2024
    Article
  8. Review
  9. Review
  10. POT1 recruits and regulates CST-Polα/Primase at human telomeres.bioRxiv : the preprint server for biology · 2023
    Article
  11. Review
  12. Article
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62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Darren E CasteelDepartment of Medicine and Cancer Center of the University of California, San Diego, La Jolla, California 92093, USA.
Shunhui Zhuang
Ying Zeng
Fred W Perrino
Gerry R Boss
Mehran Goulian
Renate B Pilz
University of California, San Diego · USWake Forest University · US

Funding

REGULATION OF GENE EXPRESSION BY cGMP and PKG IN BONER01AR051300 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PILZ, RENATE B · 2004 to 2014
$3.1M
Study of mTOR Regulation by Rheb Using Deuterium Exchange Mass SpectrometryK22CA124517 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CASTEEL, DARREN E · 2007 to 2009
$423k
NCI NIH HHS K22 CA124517NCI NIH HHS K22-CA124517NIAMS NIH HHS R01 AR051300NIAMS NIH HHS R01-AR051300
6 · The paper itself

Abstract

alpha-Accessory factor (AAF) stimulates the activity of DNA polymerase-alpha.primase, the only enzyme known to initiate DNA replication in eukaryotic cells ( Goulian, M., Heard, C. J., and Grimm, S. L. (1990) J. Biol. Chem. 265, 13221-13230 ). We purified the AAF heterodimer composed of 44- and 132-kDa subunits from cultured cells and identified full-length cDNA clones using amino acid sequences from internal peptides. AAF-132 demonstrated no homologies to known proteins; AAF-44, however, is evolutionarily related to the 32-kDa subunit of replication protein A (RPA-32) and contains an oligonucleotide/oligosaccharide-binding (OB) fold domain similar to the OB fold domains of RPA involved in single-stranded DNA binding. Epitope-tagged versions of AAF-44 and -132 formed a complex in intact cells, and purified recombinant AAF-44 bound to single-stranded DNA and stimulated DNA primase activity only in the presence of AAF-132. Mutations in conserved residues within the OB fold of AAF-44 reduced DNA binding activity of the AAF-44.AAF-132 complex. Immunofluorescence staining of AAF-44 and AAF-132 in S phase-enriched HeLa cells demonstrated punctate nuclear staining, and AAF co-localized with proliferating cell nuclear antigen, a marker for replication foci containing DNA polymerase-alpha.primase and RPA. Small interfering RNA-mediated depletion of AAF-44 in tumor cell lines inhibited [methyl-(3)H]thymidine uptake into DNA but did not affect cell viability. We conclude that AAF shares structural and functional similarities with RPA-32 and regulates DNA replication, consistent with its ability to increase polymerase-alpha.primase template affinity and stimulate both DNA primase and polymerase-alpha activities in vitro.

Indexed as

DNA ReplicationAmino Acid SequenceAnimalsBlotting, NorthernCells, CulturedDNA Polymerase IDNA PrimaseFluorescent Antibody TechniqueHeLa CellsHumansImmunoprecipitationKidneyLeukemia L1210MiceMolecular Sequence DataMutagenesis, Site-DirectedDNA polymerase alpha-primaseDNA Polymerase IDNA PrimaseProteinsReplication Protein ARNA, MessengerRNA, Small Interfering

Identifiers

PMID19119139
PMCPMC2645831
OpenAlexW2028500901

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.